Difference between revisions of "RXN-11479"

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(Created page with "Category:reaction == Reaction RXN-14160 == * common-name: ** glycerophosphorylethanolamine phosphodiesterase ** glycerophosphodiester phosphodiesterase * ec-number: ** [ht...")
(Created page with "Category:reaction == Reaction RXN-11479 == * common-name: ** 3-oxo-pimeloyl-[acp] methyl ester synthase ** 3-oxoacyl-[acyl-carrier-protein] synthase * ec-number: ** [http:...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14160 ==
+
== Reaction RXN-11479 ==
 
* common-name:
 
* common-name:
−
** glycerophosphorylethanolamine phosphodiesterase
+
** 3-oxo-pimeloyl-[acp] methyl ester synthase
−
** glycerophosphodiester phosphodiesterase
+
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.4.46 ec-3.1.4.46]
+
** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
−
** [http://enzyme.expasy.org/EC/3.1.4.2 ec-3.1.4.2]
+
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-1-GLYCEROPHOSPHORYLETHANOL-AMINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ETHANOL-AMINE]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[Glutaryl-ACP-methyl-esters]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-Ketopimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_19385]]
+
* Gene: [[E_subulatus_08948]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_13006]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_19388]]
+
* Gene: [[E_subulatus_13005]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_19384]]
+
* Gene: [[E_subulatus_22265]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_19386]]
+
* Gene: [[E_subulatus_13004]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_19387]]
+
* Gene: [[E_subulatus_22266]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7409]], phospholipid remodeling (phosphatidylethanolamine, yeast):
+
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01470 R01470]
+
** [http://www.genome.jp/dbget-bin/www_bget?R10119 R10119]
−
* METANETX-RXN : MNXR100411
+
* METANETX-RXN : MNXR113492
−
* RHEA:
+
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] synthase|3-oxo-pimeloyl-[acp] methyl ester synthase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29320 29320]
+
{{#set: ec-number=ec-2.3.1.179|ec-2.3.1.41}}
−
{{#set: common-name=glycerophosphorylethanolamine phosphodiesterase|glycerophosphodiester phosphodiesterase}}
 
−
{{#set: ec-number=ec-3.1.4.46|ec-3.1.4.2}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=6}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Latest revision as of 19:41, 17 March 2021

Reaction RXN-11479

  • common-name:
    • 3-oxo-pimeloyl-[acp] methyl ester synthase
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6519, 8-amino-7-oxononanoate biosynthesis I:
    • 8 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR113492
  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxo-pimeloyl-[acp] methyl ester synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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