Difference between revisions of "RXN-12392"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction ACETATE--COA-LIGASE-RXN == * common-name: ** acetyl-coa synthetase (amp-forming) * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.1 ec-6.2....") |
(Created page with "Category:reaction == Reaction PEPCARBOXYKIN-RXN == * common-name: ** phosphoenolpyruvate carboxykinase (atp) * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.49 ec-4.1.1...") |
||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction PEPCARBOXYKIN-RXN == |
* common-name: | * common-name: | ||
− | ** | + | ** phosphoenolpyruvate carboxykinase (atp) |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.1.1.49 ec-4.1.1.49] |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
== Reaction formula == | == Reaction formula == | ||
− | * | + | * 1 [[ATP]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[E_subulatus_03443]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | ** Category: [[orthology]] |
+ | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[E_subulatus_03444]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * | + | * [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: |
− | ** ''' | + | ** '''9''' reactions found over '''14''' reactions in the full pathway |
− | * | + | * [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation: |
− | ** ''' | + | ** '''6''' reactions found over '''4''' reactions in the full pathway |
− | + | * [[GLUCONEO-PWY]], gluconeogenesis I: | |
− | + | ** '''13''' reactions found over '''13''' reactions in the full pathway | |
− | |||
− | |||
− | * | ||
− | |||
− | |||
− | ** ''' | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | * | + | * METANETX-RXN : MNXR103099 |
− | * | + | * RHEA: |
− | {{#set: common-name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18618 18618] |
− | {{#set: ec-number=ec- | + | * LIGAND-RXN: |
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00341 R00341] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P10963 P10963] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PP01 Q9PP01] | ||
+ | ** [http://www.uniprot.org/uniprot/P43923 P43923] | ||
+ | ** [http://www.uniprot.org/uniprot/P22259 P22259] | ||
+ | ** [http://www.uniprot.org/uniprot/P42066 P42066] | ||
+ | ** [http://www.uniprot.org/uniprot/P49292 P49292] | ||
+ | ** [http://www.uniprot.org/uniprot/O49547 O49547] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9T074 Q9T074] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39294 Q39294] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RC49 Q9RC49] | ||
+ | {{#set: common-name=phosphoenolpyruvate carboxykinase (atp)}} | ||
+ | {{#set: ec-number=ec-4.1.1.49}} | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
{{#set: nb gene associated=2}} | {{#set: nb gene associated=2}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=ectocarpus_subulatus}} | + | {{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}} |
Revision as of 15:22, 15 March 2021
Contents
Reaction PEPCARBOXYKIN-RXN
- common-name:
- phosphoenolpyruvate carboxykinase (atp)
- ec-number:
- direction:
- left-to-right
Reaction formula
- 1 ATP[c] + 1 OXALACETIC_ACID[c] => 1 ADP[c] + 1 CARBON-DIOXIDE[c] + 1 PHOSPHO-ENOL-PYRUVATE[c]
Gene(s) associated with this reaction
- Gene: E_subulatus_03443
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: E_subulatus_03444
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type:
- 9 reactions found over 14 reactions in the full pathway
- PWY-561, superpathway of glyoxylate cycle and fatty acid degradation:
- 6 reactions found over 4 reactions in the full pathway
- GLUCONEO-PWY, gluconeogenesis I:
- 13 reactions found over 13 reactions in the full pathway
Reconstruction information
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_a.taliana.aragem; tool: pantograph; comment: n.a
External links
- METANETX-RXN : MNXR103099
- RHEA:
- LIGAND-RXN:
- UNIPROT: