Difference between revisions of "RXN-14049"

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(Created page with "Category:reaction == Reaction 1.2.4.4-RXN == * common-name: ** 3-methyl-2-oxobutanoate dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.2.4.4 ec-1.2.4.4] * dir...")
(Created page with "Category:reaction == Reaction ExchangeSeed-PPI == * direction: ** reversible == Reaction formula == * 1.0 PPI[C-BOUNDARY] '''<=>''' 1.0 PPI[e] == Gene(s) associate...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 1.2.4.4-RXN ==
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== Reaction ExchangeSeed-PPI ==
* common-name:
 
** 3-methyl-2-oxobutanoate dehydrogenase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.2.4.4 ec-1.2.4.4]
 
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[BCAA-dehydrogenase-2MP-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* 1.0 [[PPI]][C-BOUNDARY] '''<=>''' 1.0 [[PPI]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_02028]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_14800]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
* DB : LIGAND-RXN
 
* ID : R01701
 
{{#set: common-name=3-methyl-2-oxobutanoate dehydrogenase}}
 
{{#set: ec-number=ec-1.2.4.4}}
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
{{#set: nb gene associated=2}}
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{{#set: nb gene associated=0}}
{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=import_from_medium}}

Revision as of 15:22, 15 March 2021

Reaction ExchangeSeed-PPI

  • direction:
    • reversible

Reaction formula

  • 1.0 PPI[C-BOUNDARY] <=> 1.0 PPI[e]

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links