Difference between revisions of "RXN-14160"

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(Created page with "Category:reaction == Reaction SULFATE-ADENYLYLTRANS-RXN == * common-name: ** sulfate adenylyltransferase (atp) ** sulfate adenylyltransferase * ec-number: ** [http://enzym...")
(Created page with "Category:reaction == Reaction RXN-14160 == * common-name: ** glycerophosphorylethanolamine phosphodiesterase ** glycerophosphodiester phosphodiesterase * ec-number: ** [ht...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SULFATE-ADENYLYLTRANS-RXN ==
+
== Reaction RXN-14160 ==
 
* common-name:
 
* common-name:
−
** sulfate adenylyltransferase (atp)
+
** glycerophosphorylethanolamine phosphodiesterase
−
** sulfate adenylyltransferase
+
** glycerophosphodiester phosphodiesterase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.7.4 ec-2.7.7.4]
+
** [http://enzyme.expasy.org/EC/3.1.4.46 ec-3.1.4.46]
 +
** [http://enzyme.expasy.org/EC/3.1.4.2 ec-3.1.4.2]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SULFATE]][c] '''<=>''' 1 [[APS]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[L-1-GLYCEROPHOSPHORYLETHANOL-AMINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ETHANOL-AMINE]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_22148]]
+
* Gene: [[E_subulatus_19385]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_22149]]
+
* Gene: [[E_subulatus_19388]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_19384]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_19386]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[E_subulatus_05200]]
+
* Gene: [[E_subulatus_19387]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[SULFMETII-PWY]], assimilatory sulfate reduction II:
+
* [[PWY-7409]], phospholipid remodeling (phosphatidylethanolamine, yeast):
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5278]], sulfite oxidation III:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[DISSULFRED-PWY]], dissimilatory sulfate reduction I (to hydrogen sufide)):
 
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5340]], sulfate activation for sulfonation:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6683]], assimilatory sulfate reduction III:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[P224-PWY]]:
 
−
** '''2''' reactions found over '''n.a''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* LIGAND-RXN:
−
* METANETX-RXN : MNXR104240
+
** [http://www.genome.jp/dbget-bin/www_bget?R01470 R01470]
 +
* METANETX-RXN : MNXR100411
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18136 18136]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29320 29320]
−
* LIGAND-RXN:
+
{{#set: common-name=glycerophosphorylethanolamine phosphodiesterase|glycerophosphodiester phosphodiesterase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00529 R00529]
+
{{#set: ec-number=ec-3.1.4.46|ec-3.1.4.2}}
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q12650 Q12650]
+
{{#set: nb gene associated=5}}
−
** [http://www.uniprot.org/uniprot/O33581 O33581]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/O34764 O34764]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/Q10600 Q10600]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/O67174 O67174]
 
−
** [http://www.uniprot.org/uniprot/P21156 P21156]
 
−
** [http://www.uniprot.org/uniprot/O23324 O23324]
 
−
** [http://www.uniprot.org/uniprot/Q9JUD7 Q9JUD7]
 
−
** [http://www.uniprot.org/uniprot/Q9PM66 Q9PM66]
 
−
** [http://www.uniprot.org/uniprot/Q9JUD6 Q9JUD6]
 
−
** [http://www.uniprot.org/uniprot/P28604 P28604]
 
−
** [http://www.uniprot.org/uniprot/Q27128 Q27128]
 
−
** [http://www.uniprot.org/uniprot/P23845 P23845]
 
−
** [http://www.uniprot.org/uniprot/O43252 O43252]
 
−
** [http://www.uniprot.org/uniprot/Q43170 Q43170]
 
−
** [http://www.uniprot.org/uniprot/Q43183 Q43183]
 
−
** [http://www.uniprot.org/uniprot/Q43870 Q43870]
 
−
** [http://www.uniprot.org/uniprot/Q12555 Q12555]
 
−
** [http://www.uniprot.org/uniprot/P08536 P08536]
 
−
** [http://www.uniprot.org/uniprot/P74241 P74241]
 
−
** [http://www.uniprot.org/uniprot/O48888 O48888]
 
−
** [http://www.uniprot.org/uniprot/Q39595 Q39595]
 
−
** [http://www.uniprot.org/uniprot/Q96349 Q96349]
 
−
** [http://www.uniprot.org/uniprot/Q96541 Q96541]
 
−
** [http://www.uniprot.org/uniprot/Q9S7D8 Q9S7D8]
 
−
** [http://www.uniprot.org/uniprot/P13441 P13441]
 
−
** [http://www.uniprot.org/uniprot/P13442 P13442]
 
−
</div>
 
−
{{#set: common-name=sulfate adenylyltransferase (atp)|sulfate adenylyltransferase}}
 
−
{{#set: ec-number=ec-2.7.7.4}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=6}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction RXN-14160

  • common-name:
    • glycerophosphorylethanolamine phosphodiesterase
    • glycerophosphodiester phosphodiesterase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7409, phospholipid remodeling (phosphatidylethanolamine, yeast):
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR100411
  • RHEA:





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