Difference between revisions of "RXN-7605"

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(Created page with "Category:reaction == Reaction SULFOCYS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.144 ec-2.5.1.144] * direction: ** reversible == Reaction formula == * 1 ...")
(Created page with "Category:reaction == Reaction 5.99.1.2-RXN == * common-name: ** dna topoisomerase type i * ec-number: ** [http://enzyme.expasy.org/EC/5.6.2.a ec-5.6.2.a] * direction: ** r...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SULFOCYS-RXN ==
+
== Reaction 5.99.1.2-RXN ==
 +
* common-name:
 +
** dna topoisomerase type i
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.144 ec-2.5.1.144]
+
** [http://enzyme.expasy.org/EC/5.6.2.a ec-5.6.2.a]
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACETYLSERINE]][c] '''+''' 1 [[S2O3]][c] '''<=>''' 1 [[ACET]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SULFO-CYSTEINE]][c]
+
* 1 [[Negatively-super-coiled-DNAs]][c] '''<=>''' 1 [[Relaxed-DNAs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[EsuBft1094_21a]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[manual]]
+
* Gene: [[E_subulatus_16128]]
−
*** Source: [[esub_adding_annot_form]], Tool: [[unknown-tool]], Assignment: n.a, Comment: annotation
+
** Category: [[annotation]]
−
* Gene: [[EsuBft715_6a]]
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[manual]]
+
* Gene: [[E_subulatus_16129]]
−
*** Source: [[esub_adding_annot_form]], Tool: [[unknown-tool]], Assignment: n.a, Comment: annotation
+
** Category: [[annotation]]
−
* Gene: [[E_subulatus_06191]]
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[E_subulatus_08261]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[EsuBft169_4a]]
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[manual]]
+
* Gene: [[E_subulatus_14698]]
−
*** Source: [[esub_adding_annot_form]], Tool: [[unknown-tool]], Assignment: n.a, Comment: annotation
+
** Category: [[annotation]]
−
* Gene: [[E_subulatus_22240]]
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[E_subulatus_05543]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[E_subulatus_00981]]
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[E_subulatus_10557]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_14080]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_10556]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_03698]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_23336]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_10555]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_23338]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_23337]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_05057]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_20442]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_23335]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_03699]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_05059]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_12414]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_05058]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7870]]:
 
−
** '''2''' reactions found over '''n.a''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* DB : RHEA
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* ID : 30891
+
* METANETX-RXN : MNXR115631
−
{{#set: ec-number=ec-2.5.1.144}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q7M0H8 Q7M0H8]
 +
** [http://www.uniprot.org/uniprot/Q07050 Q07050]
 +
** [http://www.uniprot.org/uniprot/Q9JWZ5 Q9JWZ5]
 +
** [http://www.uniprot.org/uniprot/Q59046 Q59046]
 +
** [http://www.uniprot.org/uniprot/Q9PLZ2 Q9PLZ2]
 +
** [http://www.uniprot.org/uniprot/P47368 P47368]
 +
** [http://www.uniprot.org/uniprot/Q9CG80 Q9CG80]
 +
** [http://www.uniprot.org/uniprot/P43704 P43704]
 +
** [http://www.uniprot.org/uniprot/P43012 P43012]
 +
** [http://www.uniprot.org/uniprot/P0A620 P0A620]
 +
** [http://www.uniprot.org/uniprot/P04786 P04786]
 +
** [http://www.uniprot.org/uniprot/P13099 P13099]
 +
** [http://www.uniprot.org/uniprot/P06612 P06612]
 +
** [http://www.uniprot.org/uniprot/P11387 P11387]
 +
** [http://www.uniprot.org/uniprot/P07799 P07799]
 +
** [http://www.uniprot.org/uniprot/P93119 P93119]
 +
** [http://www.uniprot.org/uniprot/O13463 O13463]
 +
** [http://www.uniprot.org/uniprot/Q94705 Q94705]
 +
** [http://www.uniprot.org/uniprot/Q04750 Q04750]
 +
** [http://www.uniprot.org/uniprot/P14294 P14294]
 +
** [http://www.uniprot.org/uniprot/P30181 P30181]
 +
** [http://www.uniprot.org/uniprot/P34185 P34185]
 +
** [http://www.uniprot.org/uniprot/P30189 P30189]
 +
** [http://www.uniprot.org/uniprot/P40114 P40114]
 +
** [http://www.uniprot.org/uniprot/P41511 P41511]
 +
** [http://www.uniprot.org/uniprot/Q8I3Z9 Q8I3Z9]
 +
** [http://www.uniprot.org/uniprot/Q26024 Q26024]
 +
** [http://www.uniprot.org/uniprot/Q27529 Q27529]
 +
** [http://www.uniprot.org/uniprot/P41512 P41512]
 +
** [http://www.uniprot.org/uniprot/O24307 O24307]
 +
** [http://www.uniprot.org/uniprot/P71196 P71196]
 +
** [http://www.uniprot.org/uniprot/O70157 O70157]
 +
** [http://www.uniprot.org/uniprot/O60126 O60126]
 +
** [http://www.uniprot.org/uniprot/O61660 O61660]
 +
</div>
 +
{{#set: common-name=dna topoisomerase type i}}
 +
{{#set: ec-number=ec-5.6.2.a}}
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=20}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=manual|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=curation|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=n.a|annotation}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|esub_adding_annot_form}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Revision as of 15:14, 15 March 2021

Reaction 5.99.1.2-RXN

  • common-name:
    • dna topoisomerase type i
  • ec-number:
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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