Difference between revisions of "RXN-9651"

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(Created page with "Category:reaction == Reaction L-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN == * common-name: ** l-lactate dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.2.3 ec-1...")
(Created page with "Category:reaction == Reaction RXN-9651 == * common-name: ** 3-oxoacyl-[acyl-carrier-protein] synthase ** 3-oxo-decanoyl-[acyl-carrier protein] synthase * ec-number: ** [ht...")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction L-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN ==
+
== Reaction RXN-9651 ==
 
* common-name:
 
* common-name:
−
** l-lactate dehydrogenase
+
** 3-oxoacyl-[acyl-carrier-protein] synthase
 +
** 3-oxo-decanoyl-[acyl-carrier protein] synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.2.3 ec-1.1.2.3]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[Cytochromes-C-Oxidized]][c] '''+''' 1 [[L-LACTATE]][c] '''=>''' 2 [[Cytochromes-C-Reduced]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[MALONYL-COA]][c] '''+''' 1 [[Octanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-decanoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_24177]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[E_subulatus_13004]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_13006]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_08948]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_15038]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_22266]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_15037]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_22265]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_13005]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5458]], methylglyoxal degradation V:
+
* [[PWY-5994]], palmitate biosynthesis (type I fatty acid synthase):
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''30''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR140098
+
* METANETX-RXN : MNXR122924
−
* RHEA:
+
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] synthase|3-oxo-decanoyl-[acyl-carrier protein] synthase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19910 19910]
+
{{#set: ec-number=ec-2.3.1.41|ec-2.3.1.85|ec-2.3.1.86}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00196 R00196]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9JTX1 Q9JTX1]
 
−
** [http://www.uniprot.org/uniprot/P00175 P00175]
 
−
** [http://www.uniprot.org/uniprot/P09437 P09437]
 
−
{{#set: common-name=l-lactate dehydrogenase}}
 
−
{{#set: ec-number=ec-1.1.2.3}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=8}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Latest revision as of 19:38, 17 March 2021

Reaction RXN-9651

  • common-name:
    • 3-oxoacyl-[acyl-carrier-protein] synthase
    • 3-oxo-decanoyl-[acyl-carrier protein] synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5994, palmitate biosynthesis (type I fatty acid synthase):
    • 30 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122924
  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxo-decanoyl-[acyl-carrier protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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