Difference between revisions of "RXN-9651"

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(Created page with "Category:reaction == Reaction PRPPAMIDOTRANS-RXN == * common-name: ** amidophosphoribosyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.14 ec-2.4.2.14] * d...")
 
(Created page with "Category:reaction == Reaction RXN-9651 == * common-name: ** 3-oxoacyl-[acyl-carrier-protein] synthase ** 3-oxo-decanoyl-[acyl-carrier protein] synthase * ec-number: ** [ht...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PRPPAMIDOTRANS-RXN ==
+
== Reaction RXN-9651 ==
 
* common-name:
 
* common-name:
−
** amidophosphoribosyltransferase
+
** 3-oxoacyl-[acyl-carrier-protein] synthase
 +
** 3-oxo-decanoyl-[acyl-carrier protein] synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.2.14 ec-2.4.2.14]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[5-P-BETA-D-RIBOSYL-AMINE]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PPI]][c] '''<=>''' 1 [[GLN]][c] '''+''' 1 [[PRPP]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[MALONYL-COA]][c] '''+''' 1 [[Octanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-decanoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[E_subulatus_23373]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[E_subulatus_13004]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[E_subulatus_13006]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[E_subulatus_07851]]
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_08948]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_15038]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_22266]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_15037]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_07850]]
+
* Gene: [[E_subulatus_22265]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[E_subulatus_13005]]
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* [[PWY-5994]], palmitate biosynthesis (type I fatty acid synthase):
−
** '''6''' reactions found over '''5''' reactions in the full pathway
+
** '''30''' reactions found over '''31''' reactions in the full pathway
−
** '''6''' reactions found over '''5''' reactions in the full pathway
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* DB : UNIPROT
+
* METANETX-RXN : MNXR122924
−
* ID : P35433
+
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] synthase|3-oxo-decanoyl-[acyl-carrier protein] synthase}}
−
{{#set: common-name=amidophosphoribosyltransferase}}
+
{{#set: ec-number=ec-2.3.1.41|ec-2.3.1.85|ec-2.3.1.86}}
−
{{#set: ec-number=ec-2.4.2.14}}
+
{{#set: direction=left-to-right}}
−
{{#set: direction=reversible}}
+
{{#set: nb gene associated=8}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}

Latest revision as of 19:38, 17 March 2021

Reaction RXN-9651

  • common-name:
    • 3-oxoacyl-[acyl-carrier-protein] synthase
    • 3-oxo-decanoyl-[acyl-carrier protein] synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5994, palmitate biosynthesis (type I fatty acid synthase):
    • 30 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122924
  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxo-decanoyl-[acyl-carrier protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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