Difference between revisions of "RXN-9652"

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(Created page with "Category:reaction == Reaction ALLANTOINASE-RXN == * direction: ** left-to-right * ec_number: ** ec-3.5.2.5 == Reaction formula == * 1 S-ALLANTOIN[c] '''+''' 1 [[WATER]...")
(Created page with "Category:reaction == Reaction RXN-9652 == * common-name: ** 3-oxo-dodecanoyl-[acyl-carrier protein] synthase ** 3-oxoacyl-[acyl-carrier-protein] synthase * ec-number: ** [...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ALLANTOINASE-RXN ==
+
== Reaction RXN-9652 ==
 +
* common-name:
 +
** 3-oxo-dodecanoyl-[acyl-carrier protein] synthase
 +
** 3-oxoacyl-[acyl-carrier-protein] synthase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* ec_number:
 
−
** ec-3.5.2.5
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[S-ALLANTOIN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ALLANTOATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[Decanoyl-ACPs]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-dodecanoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[E_subulatus_22266]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_13004]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_13005]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_15037]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_08948]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_15038]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_13006]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[E_subulatus_22265]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5697]], allantoin degradation to ureidoglycolate I (urea producing):
+
* [[PWY-5994]], palmitate biosynthesis (type I fatty acid synthase):
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''30''' reactions found over '''31''' reactions in the full pathway
−
* [[PWY-5698]], allantoin degradation to ureidoglycolate II (ammonia producing):
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
+
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR107498
+
* METANETX-RXN : MNXR122925
−
* RHEA:
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{{#set: common-name=3-oxo-dodecanoyl-[acyl-carrier protein] synthase|3-oxoacyl-[acyl-carrier-protein] synthase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17030 17030]
+
{{#set: ec-number=ec-2.3.1.41|ec-2.3.1.85|ec-2.3.1.86}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02425 R02425]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P77671 P77671]
 
−
** [http://www.uniprot.org/uniprot/P32375 P32375]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec_number=ec-3.5.2.5}}
+
{{#set: nb gene associated=8}}
−
{{#set: nb gene associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction comment=annotation}}
+
{{#set: reconstruction source=ectocarpus_subulatus}}
−
{{#set: reconstruction source=esub_adding_annot_form}}
 

Latest revision as of 19:41, 17 March 2021

Reaction RXN-9652

  • common-name:
    • 3-oxo-dodecanoyl-[acyl-carrier protein] synthase
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5994, palmitate biosynthesis (type I fatty acid synthase):
    • 30 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122925
  • Property "Common-name" (as page type) with input value "3-oxo-dodecanoyl-[acyl-carrier protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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