Difference between revisions of "THIOREDOXIN-REDUCT-NADPH-RXN"

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(Created page with "Category:reaction == Reaction 2.4.2.26-RXN == * common-name: ** protein xylosyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.26 ec-2.4.2.26] * direction:...")
 
(Created page with "Category:reaction == Reaction THIOREDOXIN-REDUCT-NADPH-RXN == * common-name: ** thioredoxin reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.8.1.9 ec-1.8.1.9] * di...")
 
(3 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.4.2.26-RXN ==
+
== Reaction THIOREDOXIN-REDUCT-NADPH-RXN ==
 
* common-name:
 
* common-name:
−
** protein xylosyltransferase
+
** thioredoxin reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.2.26 ec-2.4.2.26]
+
** [http://enzyme.expasy.org/EC/1.8.1.9 ec-1.8.1.9]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Protein-L-serines]][c] '''+''' 1 [[UDP-D-XYLOSE]][c] '''=>''' 1 [[Core-Protein-L-Ser-Xyl]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[NADPH]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Red-Thioredoxin]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* Gene: [[E_subulatus_25052]]
+
* Gene: [[E_subulatus_18279]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_25053]]
+
* Gene: [[E_subulatus_10442]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_00803]]
+
* Gene: [[E_subulatus_10044]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_25054]]
+
* Gene: [[E_subulatus_23135]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_25051]]
+
* Gene: [[E_subulatus_10441]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_00804]]
+
* Gene: [[E_subulatus_21797]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_10236]]
+
* Gene: [[E_subulatus_18864]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_10235]]
+
* Gene: [[E_subulatus_06852]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_07356]]
+
* Gene: [[E_subulatus_06854]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_10234]]
+
* Gene: [[E_subulatus_14992]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_10237]]
+
* Gene: [[E_subulatus_24768]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_10233]]
+
* Gene: [[E_subulatus_10040]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[E_subulatus_20165]]
+
* Gene: [[E_subulatus_10043]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_06850]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_07751]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_20917]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_04607]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_21635]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_14991]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_06851]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_10045]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_16682]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_15936]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_10041]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_15937]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_10042]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_06853]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_23134]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[E_subulatus_11556]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[E_subulatus_25779]]
 +
** Category: [[annotation]]
 +
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
* [[THIOREDOX-PWY]], thioredoxin pathway:
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: common-name=protein xylosyltransferase}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: ec-number=ec-2.4.2.26}}
+
* METANETX-RXN : MNXR104766
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20345 20345]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02016 R02016]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q05741 Q05741]
 +
** [http://www.uniprot.org/uniprot/P56431 P56431]
 +
** [http://www.uniprot.org/uniprot/O28718 O28718]
 +
** [http://www.uniprot.org/uniprot/P80880 P80880]
 +
** [http://www.uniprot.org/uniprot/P43496 P43496]
 +
** [http://www.uniprot.org/uniprot/P94284 P94284]
 +
** [http://www.uniprot.org/uniprot/O66790 O66790]
 +
** [http://www.uniprot.org/uniprot/Q9PIY1 Q9PIY1]
 +
** [http://www.uniprot.org/uniprot/P47348 P47348]
 +
** [http://www.uniprot.org/uniprot/Q9CH02 Q9CH02]
 +
** [http://www.uniprot.org/uniprot/Q7M0Y2 Q7M0Y2]
 +
** [http://www.uniprot.org/uniprot/O26804 O26804]
 +
** [http://www.uniprot.org/uniprot/Q9JU23 Q9JU23]
 +
** [http://www.uniprot.org/uniprot/P43788 P43788]
 +
** [http://www.uniprot.org/uniprot/Q58931 Q58931]
 +
** [http://www.uniprot.org/uniprot/Q9CF34 Q9CF34]
 +
** [http://www.uniprot.org/uniprot/P0A9P4 P0A9P4]
 +
** [http://www.uniprot.org/uniprot/P23160 P23160]
 +
** [http://www.uniprot.org/uniprot/P39916 P39916]
 +
** [http://www.uniprot.org/uniprot/Q39242 Q39242]
 +
** [http://www.uniprot.org/uniprot/Q39243 Q39243]
 +
** [http://www.uniprot.org/uniprot/P38816 P38816]
 +
** [http://www.uniprot.org/uniprot/Q25861 Q25861]
 +
** [http://www.uniprot.org/uniprot/P29509 P29509]
 +
** [http://www.uniprot.org/uniprot/P52213 P52213]
 +
** [http://www.uniprot.org/uniprot/Q16881 Q16881]
 +
** [http://www.uniprot.org/uniprot/P75531 P75531]
 +
** [http://www.uniprot.org/uniprot/P74746 P74746]
 +
** [http://www.uniprot.org/uniprot/P46843 P46843]
 +
** [http://www.uniprot.org/uniprot/O54535 O54535]
 +
** [http://www.uniprot.org/uniprot/Q39951 Q39951]
 +
** [http://www.uniprot.org/uniprot/Q92375 Q92375]
 +
** [http://www.uniprot.org/uniprot/P52215 P52215]
 +
** [http://www.uniprot.org/uniprot/P51978 P51978]
 +
</div>
 +
{{#set: common-name=thioredoxin reductase}}
 +
{{#set: ec-number=ec-1.8.1.9}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=13}}
+
{{#set: nb gene associated=30}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}

Latest revision as of 19:41, 17 March 2021

Reaction THIOREDOXIN-REDUCT-NADPH-RXN

  • common-name:
    • thioredoxin reductase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • THIOREDOX-PWY, thioredoxin pathway:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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