Difference between revisions of "TRANSALDOL-RXN"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction RXN-1603 == * direction: ** left-to-right == Reaction formula == * 1 CPD-409[c] '''=>''' 1 CPD-504[c] == Gene(s) associated with this...") |
(Created page with "Category:reaction == Reaction TRANSALDOL-RXN == * common-name: ** transaldolase * ec-number: ** [http://enzyme.expasy.org/EC/2.2.1.2 ec-2.2.1.2] * direction: ** reversible...") |
||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction TRANSALDOL-RXN == |
+ | * common-name: | ||
+ | ** transaldolase | ||
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.2.1.2 ec-2.2.1.2] | ||
* direction: | * direction: | ||
− | ** | + | ** reversible |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[D-SEDOHEPTULOSE-7-P]][c] '''+''' 1 [[GAP]][c] '''<=>''' 1 [[ERYTHROSE-4P]][c] '''+''' 1 [[FRUCTOSE-6P]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | * Gene: [[E_subulatus_14763]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[E_subulatus_14764]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[E_subulatus_11135]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[ | + | * [[NONOXIPENT-PWY]], pentose phosphate pathway (non-oxidative branch) I: |
− | ** ''' | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
+ | * [[PWY-1861]], formaldehyde assimilation II (assimilatory RuMP Cycle): | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): | ||
+ | ** '''11''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-5723]], Rubisco shunt: | ||
+ | ** '''9''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[P124-PWY]], Bifidobacterium shunt: | ||
+ | ** '''11''' reactions found over '''15''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | * METANETX-RXN : | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: | + | * METANETX-RXN : MNXR104715 |
− | {{#set: nb gene associated= | + | * RHEA: |
− | {{#set: nb pathway associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17056 17056] |
− | {{#set: reconstruction category= | + | * LIGAND-RXN: |
− | {{#set: reconstruction tool= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01827 R01827] |
− | {{#set: reconstruction comment= | + | * UNIPROT: |
− | {{#set: reconstruction source= | + | ** [http://www.uniprot.org/uniprot/P17441 P17441] |
+ | ** [http://www.uniprot.org/uniprot/P17440 P17440] | ||
+ | ** [http://www.uniprot.org/uniprot/P37837 P37837] | ||
+ | ** [http://www.uniprot.org/uniprot/P45055 P45055] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JSU1 Q9JSU1] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A867 P0A867] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PIL5 Q9PIL5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58370 Q58370] | ||
+ | ** [http://www.uniprot.org/uniprot/P34214 P34214] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A870 P0A870] | ||
+ | ** [http://www.uniprot.org/uniprot/P15019 P15019] | ||
+ | ** [http://www.uniprot.org/uniprot/P53228 P53228] | ||
+ | ** [http://www.uniprot.org/uniprot/P51778 P51778] | ||
+ | ** [http://www.uniprot.org/uniprot/P72797 P72797] | ||
+ | ** [http://www.uniprot.org/uniprot/O04894 O04894] | ||
+ | ** [http://www.uniprot.org/uniprot/P78865 P78865] | ||
+ | </div> | ||
+ | {{#set: common-name=transaldolase}} | ||
+ | {{#set: ec-number=ec-2.2.1.2}} | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: nb gene associated=3}} | ||
+ | {{#set: nb pathway associated=5}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}} |
Latest revision as of 19:38, 17 March 2021
Contents
Reaction TRANSALDOL-RXN
- common-name:
- transaldolase
- ec-number:
- direction:
- reversible
Reaction formula
- 1 D-SEDOHEPTULOSE-7-P[c] + 1 GAP[c] <=> 1 ERYTHROSE-4P[c] + 1 FRUCTOSE-6P[c]
Gene(s) associated with this reaction
- Gene: E_subulatus_14763
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: E_subulatus_14764
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: E_subulatus_11135
- Category: orthology
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- NONOXIPENT-PWY, pentose phosphate pathway (non-oxidative branch) I:
- 5 reactions found over 5 reactions in the full pathway
- PWY-1861, formaldehyde assimilation II (assimilatory RuMP Cycle):
- 7 reactions found over 9 reactions in the full pathway
- P185-PWY, formaldehyde assimilation III (dihydroxyacetone cycle):
- 11 reactions found over 12 reactions in the full pathway
- PWY-5723, Rubisco shunt:
- 9 reactions found over 10 reactions in the full pathway
- P124-PWY, Bifidobacterium shunt:
- 11 reactions found over 15 reactions in the full pathway
Reconstruction information
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_a.taliana.aragem; tool: pantograph; comment: n.a
External links