Difference between revisions of "TransportSeed-ADP"

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(Created page with "Category:reaction == Reaction PROTOPORGENOXI-RXN == * common-name: ** protoporphyrinogen oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.3.4 ec-1.3.3.4] * directi...")
 
(Created page with "Category:reaction == Reaction TransportSeed-ADP == * direction: ** left-to-right == Reaction formula == * 1.0 ADP[e] '''=>''' 1.0 ADP[c] == Gene(s) associated with...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction PROTOPORGENOXI-RXN ==
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== Reaction TransportSeed-ADP ==
* common-name:
 
** protoporphyrinogen oxidase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.3.3.4 ec-1.3.3.4]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
* 3 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTOPORPHYRINOGEN]][c] '''=>''' 3 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PROTOPORPHYRIN_IX]][c]
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* 1.0 [[ADP]][e] '''=>''' 1.0 [[ADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_19533]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_19532]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_16935]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
*** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
** '''5''' reactions found over '''9''' reactions in the full pathway
 
** '''5''' reactions found over '''9''' reactions in the full pathway
 
** '''4''' reactions found over '''9''' reactions in the full pathway
 
** '''4''' reactions found over '''9''' reactions in the full pathway
 
** '''5''' reactions found over '''4''' reactions in the full pathway
 
** '''5''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from extracellular to cytosol compartment
* category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* DB : UNIPROT
 
* ID : Q49404
 
{{#set: common-name=protoporphyrinogen oxidase}}
 
{{#set: ec-number=ec-1.3.3.4}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=3}}
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{{#set: nb gene associated=0}}
{{#set: nb pathway associated=4}}
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{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
{{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}}
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{{#set: reconstruction source=import_from_medium}}

Latest revision as of 19:41, 17 March 2021

Reaction TransportSeed-ADP

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links