Difference between revisions of "TransportSeed-CPD-315"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-11486 == * common-name: ** geranylgeranyl-diphosphate all-trans-nonaprenyl diphosphate synthase * ec-number: ** [http://enzyme.expasy.org...")
(Created page with "Category:reaction == Reaction PUTTRANSAM-RXN == * direction: ** left-to-right == Reaction formula == * 1 2-KETOGLUTARATE[c] '''+''' 1 PUTRESCINE[c] '''=>''' 1 4-...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-11486 ==
+
== Reaction PUTTRANSAM-RXN ==
* common-name:
 
** geranylgeranyl-diphosphate all-trans-nonaprenyl diphosphate synthase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.5.1.85 ec-2.5.1.85]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
* 5 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[CPD-21340]][c] '''+''' 5 [[PPI]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[PUTRESCINE]][c] '''=>''' 1 [[4-AMINO-BUTYRALDEHYDE]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[E_subulatus_24160]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_01545]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_01543]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_01546]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[E_subulatus_01544]]
 
** Category: [[annotation]]
 
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
*** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PUTDEG-PWY]], putrescine degradation I:
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[esub_adding_annot_form]]; tool: [[curation]]; comment: annotation
 
== External links  ==
 
== External links  ==
* DB : RHEA
+
* METANETX-RXN : MNXR103337
* ID : 27594
+
* RHEA:
{{#set: common-name=geranylgeranyl-diphosphate all-trans-nonaprenyl diphosphate synthase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23817 23817]
{{#set: ec-number=ec-2.5.1.85}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01155 R01155]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=0}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=annotation}}
{{#set: reconstruction source=ectocarpus_subulatus}}
+
{{#set: reconstruction source=esub_adding_annot_form}}

Revision as of 15:14, 15 March 2021

Reaction PUTTRANSAM-RXN

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PUTDEG-PWY, putrescine degradation I:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR103337
  • RHEA:
  • LIGAND-RXN: