Difference between revisions of "TransportSeed-CU+2"
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(Created page with "Category:reaction == Reaction RXN-14775 == * common-name: ** acyl-coa oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.3.6 ec-1.3.3.6] * direction: ** left-to-righ...") |
(Created page with "Category:reaction == Reaction ADENPRIBOSYLTRAN-RXN == * common-name: ** adenine phosphoribosyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.7 ec-2.4.2.7]...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction ADENPRIBOSYLTRAN-RXN == |
* common-name: | * common-name: | ||
− | ** | + | ** adenine phosphoribosyltransferase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.4.2.7 ec-2.4.2.7] |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ADENINE]][c] '''+''' 1 [[PRPP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[E_subulatus_11709]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[E_subulatus_11708]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[E_subulatus_11707]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[E_subulatus_11704]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_a.taliana.aragem]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[E_subulatus_11706]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[E_subulatus_11705]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[ectocarpus_subulatus]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | *** | + | * [[PWY-7807]], glyphosate degradation III: |
− | ** ''' | + | ** '''2''' reactions found over '''7''' reactions in the full pathway |
+ | * [[PWY-6610]], adenine salvage: | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6605]], adenine and adenosine salvage II: | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[P121-PWY]], adenine and adenosine salvage I: | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-7805]], (aminomethyl)phosphonate degradation: | ||
+ | ** '''2''' reactions found over '''8''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_a.taliana.aragem]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[ectocarpus_subulatus]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: common-name= | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: ec-number=ec- | + | * METANETX-RXN : MNXR95482 |
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16609 16609] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00190 R00190] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P12426 P12426] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X1A4 Q9X1A4] | ||
+ | ** [http://www.uniprot.org/uniprot/P47202 P47202] | ||
+ | ** [http://www.uniprot.org/uniprot/O34443 O34443] | ||
+ | ** [http://www.uniprot.org/uniprot/O25296 O25296] | ||
+ | ** [http://www.uniprot.org/uniprot/P47518 P47518] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PP06 Q9PP06] | ||
+ | ** [http://www.uniprot.org/uniprot/P43856 P43856] | ||
+ | ** [http://www.uniprot.org/uniprot/O51718 O51718] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZLQ9 Q9ZLQ9] | ||
+ | ** [http://www.uniprot.org/uniprot/P69503 P69503] | ||
+ | ** [http://www.uniprot.org/uniprot/P07741 P07741] | ||
+ | ** [http://www.uniprot.org/uniprot/P08030 P08030] | ||
+ | ** [http://www.uniprot.org/uniprot/P31166 P31166] | ||
+ | ** [http://www.uniprot.org/uniprot/P36973 P36973] | ||
+ | ** [http://www.uniprot.org/uniprot/P52561 P52561] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42563 Q42563] | ||
+ | ** [http://www.uniprot.org/uniprot/Q49639 Q49639] | ||
+ | ** [http://www.uniprot.org/uniprot/P73935 P73935] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9SUW2 Q9SUW2] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43199 Q43199] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9SU38 Q9SU38] | ||
+ | </div> | ||
+ | {{#set: common-name=adenine phosphoribosyltransferase}} | ||
+ | {{#set: ec-number=ec-2.4.2.7}} | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=6}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=ectocarpus_subulatus}} | + | {{#set: reconstruction source=output_pantograph_a.taliana.aragem|ectocarpus_subulatus}} |
Revision as of 15:14, 15 March 2021
Contents
Reaction ADENPRIBOSYLTRAN-RXN
- common-name:
- adenine phosphoribosyltransferase
- ec-number:
- direction:
- left-to-right
Reaction formula
Gene(s) associated with this reaction
- Gene: E_subulatus_11709
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_11708
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_11707
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_11704
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_a.taliana.aragem, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: E_subulatus_11706
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: E_subulatus_11705
- Category: annotation
- Source: ectocarpus_subulatus, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7807, glyphosate degradation III:
- 2 reactions found over 7 reactions in the full pathway
- PWY-6610, adenine salvage:
- 1 reactions found over 3 reactions in the full pathway
- PWY-6605, adenine and adenosine salvage II:
- 1 reactions found over 2 reactions in the full pathway
- P121-PWY, adenine and adenosine salvage I:
- 1 reactions found over 2 reactions in the full pathway
- PWY-7805, (aminomethyl)phosphonate degradation:
- 2 reactions found over 8 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_a.taliana.aragem; tool: pantograph; comment: n.a
- category: annotation; source: ectocarpus_subulatus; tool: pathwaytools; comment: n.a
External links