Difference between revisions of "RUMFLAFD1 RS0101235"
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(Created page with "Category:gene == Gene RUMFLAFD1_RS0114960 == * right-end-position: ** 16888 * transcription-direction: ** negative * left-end-position: ** 15962 * centisome-position: ** 1...") |
(Created page with "Category:gene == Gene RUMFLAFD1_RS0101235 == * right-end-position: ** 33420 * transcription-direction: ** positive * left-end-position: ** 32464 * centisome-position: ** 7...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene RUMFLAFD1_RS0101235 == |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 33420 |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 32464 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 77.22537 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[Ruminococcus_23112020]] | * [[Ruminococcus_23112020]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[GLUCOKIN-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[HEX7]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[HEXOKINASE-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[MANNKIN-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[N-ACETYLGLUCOSAMINE-KINASE-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[NANK-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** '''3''' reactions found over '''9''' reactions in the full pathway | + | * [[GLYCOCAT-PWY]] |
− | * [[ | + | ** '''7''' reactions found over '''8''' reactions in the full pathway |
− | ** ''' | + | * [[PWY-2722]] |
− | * [[PWY- | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
− | ** '''4''' reactions found over ''' | + | * [[ANAGLYCOLYSIS-PWY]] |
− | {{#set: right-end-position= | + | ** '''10''' reactions found over '''11''' reactions in the full pathway |
− | {{#set: transcription-direction= | + | * [[PWY-7238]] |
− | {{#set: left-end-position= | + | ** '''6''' reactions found over '''8''' reactions in the full pathway |
− | {{#set: centisome-position= | + | * [[PWY-621]] |
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[TREDEGLOW-PWY]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[GLUCOSE1PMETAB-PWY]] | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY0-1182]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[P122-PWY]] | ||
+ | ** '''11''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY-5514]] | ||
+ | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-2723]] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5661]] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[P124-PWY]] | ||
+ | ** '''11''' reactions found over '''15''' reactions in the full pathway | ||
+ | * [[PWY-7385]] | ||
+ | ** '''5''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-3861]] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-6992]] | ||
+ | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6140]] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-6517]] | ||
+ | ** '''2''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-6906]] | ||
+ | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-6138]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY0-1324]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: right-end-position=33420}} | ||
+ | {{#set: transcription-direction=positive}} | ||
+ | {{#set: left-end-position=32464}} | ||
+ | {{#set: centisome-position=77.22537 }} | ||
{{#set: organism associated=Ruminococcus_23112020}} | {{#set: organism associated=Ruminococcus_23112020}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=6}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=21}} |
Latest revision as of 17:41, 15 January 2021
Contents
Gene RUMFLAFD1_RS0101235
- right-end-position:
- 33420
- transcription-direction:
- positive
- left-end-position:
- 32464
- centisome-position:
- 77.22537
Organism(s) associated with this gene
Reaction(s) associated
- GLUCOKIN-RXN
- Category: annotation
- source: genome_a; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014; tool: pantograph; comment: n.a
- source: output_pantograph_bthetaiotaomicron_heinken2013; tool: pantograph; comment: n.a
- source: output_pantograph_l_plantarum_wcfs1; tool: pantograph; comment: n.a
- Category: annotation
- HEX7
- Category: orthology
- source: output_pantograph_ecoli; tool: pantograph; comment: n.a
- Category: orthology
- HEXOKINASE-RXN
- Category: annotation
- source: genome_a; tool: pathwaytools; comment: n.a
- Category: annotation
- MANNKIN-RXN
- Category: orthology
- source: output_pantograph_bthetaiotaomicron_heinken2013; tool: pantograph; comment: n.a
- Category: orthology
- N-ACETYLGLUCOSAMINE-KINASE-RXN
- Category: orthology
- source: output_pantograph_ecoli; tool: pantograph; comment: n.a
- source: output_pantograph_bthetaiotaomicron_heinken2013; tool: pantograph; comment: n.a
- Category: orthology
- NANK-RXN
- Category: orthology
- source: output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- GLYCOCAT-PWY
- 7 reactions found over 8 reactions in the full pathway
- PWY-2722
- 1 reactions found over 3 reactions in the full pathway
- ANAGLYCOLYSIS-PWY
- 10 reactions found over 11 reactions in the full pathway
- PWY-7238
- 6 reactions found over 8 reactions in the full pathway
- PWY-621
- 2 reactions found over 4 reactions in the full pathway
- TREDEGLOW-PWY
- 1 reactions found over 2 reactions in the full pathway
- GLUCOSE1PMETAB-PWY
- 2 reactions found over 5 reactions in the full pathway
- PWY0-1182
- 1 reactions found over 2 reactions in the full pathway
- P122-PWY
- 11 reactions found over 18 reactions in the full pathway
- PWY-5514
- 3 reactions found over 7 reactions in the full pathway
- PWY-2723
- 2 reactions found over 3 reactions in the full pathway
- PWY-5661
- 2 reactions found over 3 reactions in the full pathway
- P124-PWY
- 11 reactions found over 15 reactions in the full pathway
- PWY-7385
- 5 reactions found over 9 reactions in the full pathway
- PWY-3861
- 2 reactions found over 4 reactions in the full pathway
- PWY-6992
- 3 reactions found over 5 reactions in the full pathway
- PWY-6140
- 1 reactions found over 4 reactions in the full pathway
- PWY-6517
- 2 reactions found over 1 reactions in the full pathway
- PWY-6906
- 3 reactions found over 8 reactions in the full pathway
- PWY-6138
- 1 reactions found over 5 reactions in the full pathway
- PWY0-1324
- 1 reactions found over 3 reactions in the full pathway