Difference between revisions of "RUMFLAFD1 RS0118985"
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(Created page with "Category:gene == Gene RUMFLAFD1_RS0107460 == * right-end-position: ** 15489 * transcription-direction: ** negative * left-end-position: ** 14428 * centisome-position: ** 3...") |
(Created page with "Category:gene == Gene RUMFLAFD1_RS0118985 == * right-end-position: ** 161189 * transcription-direction: ** negative * left-end-position: ** 160110 * common-name: ** asd *...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene RUMFLAFD1_RS0118985 == |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 161189 |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 160110 |
| + | * common-name: | ||
| + | ** asd | ||
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 93.37276 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[Ruminococcus_23112020]] | * [[Ruminococcus_23112020]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | *** source: [[ | + | *** source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a |
| + | *** source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[DAPLYSINESYN-PWY]] |
| − | ** '''6''' reactions found over '''6''' reactions in the full pathway | + | ** '''8''' reactions found over '''9''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-2942]] |
| − | ** ''' | + | ** '''7''' reactions found over '''7''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6562]] |
| − | ** ''' | + | ** '''3''' reactions found over '''6''' reactions in the full pathway |
| − | {{#set: right-end-position= | + | * [[P101-PWY]] |
| + | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[HOMOSERSYN-PWY]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-2941]] | ||
| + | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-5097]] | ||
| + | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-7153]] | ||
| + | ** '''2''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-6559]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | {{#set: right-end-position=161189}} | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: left-end-position= | + | {{#set: left-end-position=160110}} |
| − | {{#set: centisome-position= | + | {{#set: common-name=asd}} |
| + | {{#set: centisome-position=93.37276 }} | ||
{{#set: organism associated=Ruminococcus_23112020}} | {{#set: organism associated=Ruminococcus_23112020}} | ||
{{#set: nb reaction associated=1}} | {{#set: nb reaction associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=9}} |
Latest revision as of 17:42, 15 January 2021
Contents
Gene RUMFLAFD1_RS0118985
- right-end-position:
- 161189
- transcription-direction:
- negative
- left-end-position:
- 160110
- common-name:
- asd
- centisome-position:
- 93.37276
Organism(s) associated with this gene
Reaction(s) associated
- ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN
- Category: annotation
- source: genome_a; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014; tool: pantograph; comment: n.a
- source: output_pantograph_bifidobacteriumadolescentisl2-32; tool: pantograph; comment: n.a
- source: output_pantograph_bthetaiotaomicron_heinken2013; tool: pantograph; comment: n.a
- source: output_pantograph_l_plantarum_wcfs1; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- DAPLYSINESYN-PWY
- 8 reactions found over 9 reactions in the full pathway
- PWY-2942
- 7 reactions found over 7 reactions in the full pathway
- PWY-6562
- 3 reactions found over 6 reactions in the full pathway
- P101-PWY
- 2 reactions found over 5 reactions in the full pathway
- HOMOSERSYN-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY-2941
- 6 reactions found over 9 reactions in the full pathway
- PWY-5097
- 7 reactions found over 7 reactions in the full pathway
- PWY-7153
- 2 reactions found over 8 reactions in the full pathway
- PWY-6559
- 3 reactions found over 4 reactions in the full pathway
