Difference between revisions of "RUMFLAFD1 RS0110755"

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(Created page with "Category:gene == Gene RUMFLAFD1_RS0117205 == * right-end-position: ** 84041 * transcription-direction: ** negative * left-end-position: ** 82743 * common-name: ** lysa * c...")
(Created page with "Category:gene == Gene RUMFLAFD1_RS0110755 == * right-end-position: ** 40617 * transcription-direction: ** negative * left-end-position: ** 39259 * centisome-position: ** 9...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene RUMFLAFD1_RS0117205 ==
+
== Gene RUMFLAFD1_RS0110755 ==
 
* right-end-position:
 
* right-end-position:
−
** 84041
+
** 40617
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* left-end-position:
 
* left-end-position:
−
** 82743
+
** 39259
−
* common-name:
 
−
** lysa
 
 
* centisome-position:
 
* centisome-position:
−
** 65.76508    
+
** 92.96252    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[Ruminococcus_23112020]]
 
* [[Ruminococcus_23112020]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[DIAMINOPIMDECARB-RXN]]
+
* [[2-METHYLCITRATE-SYNTHASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 +
* [[CITSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[CS]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[DAPLYSINESYN-PWY]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY0-42]]
−
* [[PWY-5097]]
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-5747]]
−
* [[PWY-2941]]
+
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5690]]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7254]]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6549]]
 
** '''6''' reactions found over '''9''' reactions in the full pathway
 
** '''6''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-2942]]
+
* [[PWY-7124]]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''7''' reactions found over '''8''' reactions in the full pathway
−
{{#set: right-end-position=84041}}
+
* [[GLYOXYLATE-BYPASS]]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[FERMENTATION-PWY]]
 +
** '''11''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-6969]]
 +
** '''5''' reactions found over '''12''' reactions in the full pathway
 +
* [[TCA]]
 +
** '''5''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6728]]
 +
** '''6''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-5913]]
 +
** '''7''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5750]]
 +
** '''3''' reactions found over '''2''' reactions in the full pathway
 +
* [[P105-PWY]]
 +
** '''5''' reactions found over '''11''' reactions in the full pathway
 +
* [[REDCITCYC]]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY66-398]]
 +
** '''4''' reactions found over '''11''' reactions in the full pathway
 +
</div>
 +
{{#set: right-end-position=40617}}
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: left-end-position=82743}}
+
{{#set: left-end-position=39259}}
−
{{#set: common-name=lysa}}
+
{{#set: centisome-position=92.96252   }}
−
{{#set: centisome-position=65.76508   }}
 
 
{{#set: organism associated=Ruminococcus_23112020}}
 
{{#set: organism associated=Ruminococcus_23112020}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=16}}

Latest revision as of 17:42, 15 January 2021

Gene RUMFLAFD1_RS0110755

  • right-end-position:
    • 40617
  • transcription-direction:
    • negative
  • left-end-position:
    • 39259
  • centisome-position:
    • 92.96252

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-42
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5747
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5690
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-7254
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-6549
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-7124
    • 7 reactions found over 8 reactions in the full pathway
  • GLYOXYLATE-BYPASS
    • 4 reactions found over 6 reactions in the full pathway
  • FERMENTATION-PWY
    • 11 reactions found over 16 reactions in the full pathway
  • PWY-6969
    • 5 reactions found over 12 reactions in the full pathway
  • TCA
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-6728
    • 6 reactions found over 19 reactions in the full pathway
  • PWY-5913
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-5750
    • 3 reactions found over 2 reactions in the full pathway
  • P105-PWY
    • 5 reactions found over 11 reactions in the full pathway
  • REDCITCYC
    • 4 reactions found over 9 reactions in the full pathway
  • PWY66-398
    • 4 reactions found over 11 reactions in the full pathway




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