Difference between revisions of "RUMFLAFD1 RS0117200"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene RUMFLAFD1_RS0104190 == * right-end-position: ** 6352 * transcription-direction: ** negative * left-end-position: ** 4328 * centisome-position: ** 28....")
(Created page with "Category:gene == Gene RUMFLAFD1_RS0117200 == * right-end-position: ** 82228 * transcription-direction: ** negative * left-end-position: ** 80291 * centisome-position: ** 6...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene RUMFLAFD1_RS0104190 ==
+
== Gene RUMFLAFD1_RS0117200 ==
 
* right-end-position:
 
* right-end-position:
−
** 6352
+
** 82228
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* left-end-position:
 
* left-end-position:
−
** 4328
+
** 80291
 
* centisome-position:
 
* centisome-position:
−
** 28.445614    
+
** 63.816208    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[Ruminococcus_23112020]]
 
* [[Ruminococcus_23112020]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[5.99.1.2-RXN]]
+
* [[3-ISOPROPYLMALISOM-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 +
* [[ACONITATEDEHYDR-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: right-end-position=6352}}
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
 +
* [[ACONITATEHYDR-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14047]]
 +
** Category: [[annotation]]
 +
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8991]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[LEUSYN-PWY]]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6871]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5913]]
 +
** '''7''' reactions found over '''11''' reactions in the full pathway
 +
* [[P105-PWY]]
 +
** '''5''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6728]]
 +
** '''6''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-7124]]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[P23-PWY]]
 +
** '''6''' reactions found over '''12''' reactions in the full pathway
 +
* [[REDCITCYC]]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[TCA]]
 +
** '''5''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5392]]
 +
** '''4''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY66-398]]
 +
** '''4''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6549]]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5750]]
 +
** '''3''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5690]]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[FERMENTATION-PWY]]
 +
** '''11''' reactions found over '''16''' reactions in the full pathway
 +
* [[GLYOXYLATE-BYPASS]]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7254]]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6969]]
 +
** '''5''' reactions found over '''12''' reactions in the full pathway
 +
</div>
 +
{{#set: right-end-position=82228}}
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: left-end-position=4328}}
+
{{#set: left-end-position=80291}}
−
{{#set: centisome-position=28.445614   }}
+
{{#set: centisome-position=63.816208   }}
 
{{#set: organism associated=Ruminococcus_23112020}}
 
{{#set: organism associated=Ruminococcus_23112020}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=18}}

Latest revision as of 17:42, 15 January 2021

Gene RUMFLAFD1_RS0117200

  • right-end-position:
    • 82228
  • transcription-direction:
    • negative
  • left-end-position:
    • 80291
  • centisome-position:
    • 63.816208

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • LEUSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6871
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-5913
    • 7 reactions found over 11 reactions in the full pathway
  • P105-PWY
    • 5 reactions found over 11 reactions in the full pathway
  • PWY-6728
    • 6 reactions found over 19 reactions in the full pathway
  • PWY-7124
    • 7 reactions found over 8 reactions in the full pathway
  • P23-PWY
    • 6 reactions found over 12 reactions in the full pathway
  • REDCITCYC
    • 4 reactions found over 9 reactions in the full pathway
  • TCA
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-5392
    • 4 reactions found over 12 reactions in the full pathway
  • PWY66-398
    • 4 reactions found over 11 reactions in the full pathway
  • PWY-6549
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-5750
    • 3 reactions found over 2 reactions in the full pathway
  • PWY-5690
    • 4 reactions found over 9 reactions in the full pathway
  • FERMENTATION-PWY
    • 11 reactions found over 16 reactions in the full pathway
  • GLYOXYLATE-BYPASS
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-7254
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-6969
    • 5 reactions found over 12 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//rflavgem/index.php?title=RUMFLAFD1_RS0117200&oldid=10426"