|
|
| (One intermediate revision by one other user not shown) |
| Line 1: |
Line 1: |
| | [[Category:reaction]] | | [[Category:reaction]] |
| − | == Reaction ACP-S-ACETYLTRANSFER-RXN == | + | == Reaction ExchangeSeed-CPD0-1421 == |
| | * direction: | | * direction: |
| | ** reversible | | ** reversible |
| − | * ec-number:
| |
| − | ** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
| |
| − | ** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
| |
| − | ** [http://enzyme.expasy.org/EC/2.3.1.38 ec-2.3.1.38]
| |
| | == Reaction formula == | | == Reaction formula == |
| − | * 1 [[ACETYL-COA]][c] '''+''' 1 [[ACP]][c] '''<=>''' 1 [[ACETYL-ACP]][c] '''+''' 1 [[CO-A]][c] | + | * 1.0 [[CPD0-1421]][C-BOUNDARY] '''<=>''' 1.0 [[CPD0-1421]][e] |
| | == Gene(s) associated with this reaction == | | == Gene(s) associated with this reaction == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * Gene: [[RUMFLAFD1_RS0110270]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[RUMFLAFD1_RS0110220]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[RUMFLAFD1_RS0107960]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[RUMFLAFD1_RS0110210]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[RUMFLAFD1_RS0106605]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | *** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | *** Source: [[output_pantograph_bthetaiotaomicron_heinken2013]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[RUMFLAFD1_RS0106655]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[RUMFLAFD1_RS0106600]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[RUMFLAFD1_RS0110275]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[RUMFLAFD1_RS0110290]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[RUMFLAFD1_RS0110200]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[RUMFLAFD1_RS0106625]]
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | *** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | *** Source: [[output_pantograph_bthetaiotaomicron_heinken2013]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | </div>
| |
| | == Pathway(s) == | | == Pathway(s) == |
| − | * [[PWY-5966]], fatty acid biosynthesis initiation II:
| |
| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
| |
| − | * [[FASYN-INITIAL-PWY]], superpathway of fatty acid biosynthesis initiation (E. coli):
| |
| − | ** '''5''' reactions found over '''2''' reactions in the full pathway
| |
| | == Reconstruction information == | | == Reconstruction information == |
| − | * category: [[orthology]]; source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a | + | * category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment |
| − | * category: [[orthology]]; source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
| |
| | == External links == | | == External links == |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=41791 41791]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01624 R01624]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/P49327 P49327]
| |
| − | ** [http://www.uniprot.org/uniprot/P08757 P08757]
| |
| − | ** [http://www.uniprot.org/uniprot/P07149 P07149]
| |
| − | ** [http://www.uniprot.org/uniprot/P12276 P12276]
| |
| − | ** [http://www.uniprot.org/uniprot/P12785 P12785]
| |
| | {{#set: direction=reversible}} | | {{#set: direction=reversible}} |
| − | {{#set: ec-number=ec-2.3.1.38|ec-2.3.1.85|ec-2.3.1.86}}
| + | {{#set: nb gene associated=0}} |
| − | {{#set: nb gene associated=11}} | + | {{#set: nb pathway associated=0}} |
| − | {{#set: nb pathway associated=2}} | + | {{#set: reconstruction category=manual}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: reconstruction tool=curation}} |
| − | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}} |
| − | {{#set: reconstruction comment=n.a}} | + | {{#set: reconstruction source=import_from_medium}} |
| − | {{#set: reconstruction source=output_pantograph_bthetaiotaomicron_heinken2013|output_pantograph_bifidobacteriumadolescentisl2-32|output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014|output_pantograph_ecoli}} | |
