Difference between revisions of "SPERMACTRAN-RXN"

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(Created page with "Category:reaction == Reaction ARACHIDONATE-5-LIPOXYGENASE-RXN == * direction: ** left-to-right * common-name: ** lta synthase family protein * synonymous: ** leukotriene-a...")
 
(Created page with "Category:reaction == Reaction SPERMACTRAN-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.57 ec-2.3.1.57] == Reaction formula == *...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ARACHIDONATE-5-LIPOXYGENASE-RXN ==
+
== Reaction SPERMACTRAN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
+
* ec-number:
−
** lta synthase family protein
+
** [http://enzyme.expasy.org/EC/2.3.1.57 ec-2.3.1.57]
−
* synonymous:
 
−
** leukotriene-a4 synthase
 
−
** 5δ-lipoxygenase
 
−
** arachidonic 5-lipoxygenase
 
−
** lta synthase
 
−
** leukotriene a4 synthase
 
−
** δ5-lipoxygenase
 
−
** arachidonic acid 5-lipoxygenase
 
−
** c-5-lipoxygenase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ARACHIDONIC_ACID]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[6E8Z11Z14Z-5S-5-HYDROPEROXYCOSA-6]][c]
+
* 1 [[ACETYL-COA]][c] '''+''' 1 [[SPERMIDINE]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-568]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[RUMFLAFD1_RS0119795]]
+
* Gene: [[RUMFLAFD1_RS0108435]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0118950]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS21520]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0110925]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY66-375]], leukotriene biosynthesis:
+
* [[PWY-6117]], spermine and spermidine degradation I:
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17486 17486]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28150 28150]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01595 R01595]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P12527 P12527]
 
−
** [http://www.uniprot.org/uniprot/P09917 P09917]
 
−
** [http://www.uniprot.org/uniprot/Q7M0C1 Q7M0C1]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=lta synthase family protein}}
+
{{#set: ec-number=ec-2.3.1.57}}
−
{{#set: synonymous=leukotriene a4 synthase|leukotriene-a4 synthase|arachidonic 5-lipoxygenase|lta synthase|c-5-lipoxygenase|arachidonic acid 5-lipoxygenase|5δ-lipoxygenase|δ5-lipoxygenase}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb gene associated=1}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome_a}}
+
{{#set: reconstruction source=output_pantograph_ecoli}}

Latest revision as of 17:47, 15 January 2021

Reaction SPERMACTRAN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6117, spermine and spermidine degradation I:
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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