Difference between revisions of "GLYCOGEN-BRANCH-RXN"

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(Created page with "Category:reaction == Reaction DIAMINOPIMELATE-DEHYDROGENASE-RXN == * direction: ** reversible * common-name: ** diaminopimelate dehydrogenase * ec-number: ** [http://enzym...")
(Created page with "Category:reaction == Reaction GLYCOGEN-BRANCH-RXN == * direction: ** left-to-right * common-name: ** 1,4-alpha-glucan branching protein glgb * ec-number: ** [http://enzyme...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DIAMINOPIMELATE-DEHYDROGENASE-RXN ==
+
== Reaction GLYCOGEN-BRANCH-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** diaminopimelate dehydrogenase
+
** 1,4-alpha-glucan branching protein glgb
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.1.16 ec-1.4.1.16]
+
** [http://enzyme.expasy.org/EC/2.4.1.18 ec-2.4.1.18]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MESO-DIAMINOPIMELATE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[L-ALPHA-AMINO-EPSILON-KETO-PIMELATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[1-4-alpha-D-Glucan]][c] '''=>''' 1 [[Glycogens]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[RUMFLAFD1_RS0112175]]
+
* Gene: [[RUMFLAFD1_RS0114570]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0100525]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-2942]], L-lysine biosynthesis III:
+
* [[GLYCOGENSYNTH-PWY]], glycogen biosynthesis I (from ADP-D-Glucose):
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13564 13564]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02755 R02755]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P04964 P04964]
+
** [http://www.uniprot.org/uniprot/Q04446 Q04446]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/P30539 P30539]
−
{{#set: common-name=diaminopimelate dehydrogenase}}
+
** [http://www.uniprot.org/uniprot/P30537 P30537]
−
{{#set: ec-number=ec-1.4.1.16}}
+
** [http://www.uniprot.org/uniprot/P45177 P45177]
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/P16954 P16954]
 +
** [http://www.uniprot.org/uniprot/Q41740 Q41740]
 +
** [http://www.uniprot.org/uniprot/Q01401 Q01401]
 +
** [http://www.uniprot.org/uniprot/P07762 P07762]
 +
** [http://www.uniprot.org/uniprot/Q7M284 Q7M284]
 +
** [http://www.uniprot.org/uniprot/P30538 P30538]
 +
** [http://www.uniprot.org/uniprot/Q08809 Q08809]
 +
** [http://www.uniprot.org/uniprot/Q59243 Q59243]
 +
** [http://www.uniprot.org/uniprot/Q40733 Q40733]
 +
** [http://www.uniprot.org/uniprot/Q59832 Q59832]
 +
** [http://www.uniprot.org/uniprot/P30924 P30924]
 +
** [http://www.uniprot.org/uniprot/P39118 P39118]
 +
** [http://www.uniprot.org/uniprot/P52980 P52980]
 +
** [http://www.uniprot.org/uniprot/P32775 P32775]
 +
** [http://www.uniprot.org/uniprot/Q42526 Q42526]
 +
** [http://www.uniprot.org/uniprot/Q42531 Q42531]
 +
** [http://www.uniprot.org/uniprot/Q59833 Q59833]
 +
** [http://www.uniprot.org/uniprot/O81387 O81387]
 +
** [http://www.uniprot.org/uniprot/O24421 O24421]
 +
** [http://www.uniprot.org/uniprot/Q08047 Q08047]
 +
** [http://www.uniprot.org/uniprot/O24393 O24393]
 +
** [http://www.uniprot.org/uniprot/Q41058 Q41058]
 +
** [http://www.uniprot.org/uniprot/Q41059 Q41059]
 +
** [http://www.uniprot.org/uniprot/P93691 P93691]
 +
** [http://www.uniprot.org/uniprot/O04074 O04074]
 +
** [http://www.uniprot.org/uniprot/O24397 O24397]
 +
** [http://www.uniprot.org/uniprot/O49953 O49953]
 +
** [http://www.uniprot.org/uniprot/O04864 O04864]
 +
</div>
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=1,4-alpha-glucan branching protein glgb}}
 +
{{#set: ec-number=ec-2.4.1.18}}
 +
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Latest revision as of 17:47, 15 January 2021

Reaction GLYCOGEN-BRANCH-RXN

  • direction:
    • left-to-right
  • common-name:
    • 1,4-alpha-glucan branching protein glgb
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GLYCOGENSYNTH-PWY, glycogen biosynthesis I (from ADP-D-Glucose):
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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