Difference between revisions of "PRPPS"

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(Created page with "Category:reaction == Reaction 2.1.1.19-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.19 ec-2.1.1.19] == Reaction formula == * 1 [...")
 
(Created page with "Category:reaction == Reaction PRPPS == * direction: ** reversible * common-name: ** phosphoribosylpyrophosphate synthetase == Reaction formula == * 1.0 ATP[c] '''+'''...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 2.1.1.19-RXN ==
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== Reaction PRPPS ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* ec-number:
+
* common-name:
** [http://enzyme.expasy.org/EC/2.1.1.19 ec-2.1.1.19]
+
** phosphoribosylpyrophosphate synthetase
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[5-METHYL-THF-GLU-N]][c] '''+''' 1 [[CPD-7670]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[THF-GLU-N]][c] '''+''' 1 [[TRIMETHYLSULFONIUM]][c]
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* 1.0 [[ATP]][c] '''+''' 1.0 [[CPD-15318]][c] '''<=>''' 1.0 [[AMP]][c] '''+''' 1.0 [[PROTON]][c] '''+''' 1.0 [[PRPP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[RUMFLAFD1_RS0101320]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_bthetaiotaomicron_heinken2013]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0118360]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-2201]], folate transformations I:
 
** '''12''' reactions found over '''12''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13695 13695]
+
{{#set: common-name=phosphoribosylpyrophosphate synthetase}}
* LIGAND-RXN:
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{{#set: nb gene associated=2}}
** [http://www.genome.jp/dbget-bin/www_bget?R02573 R02573]
+
{{#set: nb pathway associated=0}}
{{#set: direction=left-to-right}}
+
{{#set: reconstruction category=orthology}}
{{#set: ec-number=ec-2.1.1.19}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: nb gene associated=0}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=genome_a}}
+
{{#set: reconstruction source=output_pantograph_bifidobacteriumadolescentisl2-32|output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014|output_pantograph_ecoli|output_pantograph_l_plantarum_wcfs1|output_pantograph_bthetaiotaomicron_heinken2013}}

Latest revision as of 17:48, 15 January 2021

Reaction PRPPS

  • direction:
    • reversible
  • common-name:
    • phosphoribosylpyrophosphate synthetase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links