Difference between revisions of "ACETYL-COA-CARBOXYLTRANSFER-RXN"

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(Created page with "Category:reaction == Reaction GLY3KIN-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.31 ec-2.7.1.31] == Reaction formula == * 1 ...")
 
(Created page with "Category:reaction == Reaction ACETYL-COA-CARBOXYLTRANSFER-RXN == * direction: ** left-to-right * common-name: ** acetyl-coa carboxylase biotin carboxyl carrier protein sub...")
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLY3KIN-RXN ==
+
== Reaction ACETYL-COA-CARBOXYLTRANSFER-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** acetyl-coa carboxylase biotin carboxyl carrier protein subunit
 +
** acetyl-coa carboxylase carboxyltransferase subunit beta
 +
** acetyl-coa carboxylase biotin carboxylase subunit
 +
** acetyl-coa carboxylase carboxyltransferase subunit alpha
 +
** acetyl-coa carboxylase biotin carboxyl carrier protein
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.31 ec-2.7.1.31]
+
** [http://enzyme.expasy.org/EC/6.4.1.2 ec-6.4.1.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[GLYCERATE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[G3P]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ACETYL-COA]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[RUMFLAFD1_RS0103800]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[RUMFLAFD1_RS0106650]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0106630]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0106640]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_bthetaiotaomicron_heinken2013]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0116920]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0106645]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0115990]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0105330]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-181]], photorespiration:
+
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle:
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast):
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5744]], glyoxylate assimilation:
 +
** '''2''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-6679]], jadomycin biosynthesis:
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4381]], fatty acid biosynthesis initiation I:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5743]], 3-hydroxypropanoate cycle:
 +
** '''2''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-6722]], candicidin biosynthesis:
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23517 23517]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11309 11309]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01514 R01514]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00742 R00742]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.7.1.31}}
+
{{#set: common-name=acetyl-coa carboxylase biotin carboxyl carrier protein|acetyl-coa carboxylase carboxyltransferase subunit alpha|acetyl-coa carboxylase biotin carboxyl carrier protein subunit|acetyl-coa carboxylase carboxyltransferase subunit beta|acetyl-coa carboxylase biotin carboxylase subunit}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-6.4.1.2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=7}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=7}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_bthetaiotaomicron_heinken2013|output_pantograph_l_plantarum_wcfs1|output_pantograph_bifidobacteriumadolescentisl2-32|output_pantograph_ecoli}}
+
{{#set: reconstruction source=output_pantograph_bifidobacteriumadolescentisl2-32|genome_a|output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014|output_pantograph_ecoli|output_pantograph_l_plantarum_wcfs1}}

Latest revision as of 17:48, 15 January 2021

Reaction ACETYL-COA-CARBOXYLTRANSFER-RXN

  • direction:
    • left-to-right
  • common-name:
    • acetyl-coa carboxylase biotin carboxyl carrier protein subunit
    • acetyl-coa carboxylase carboxyltransferase subunit beta
    • acetyl-coa carboxylase biotin carboxylase subunit
    • acetyl-coa carboxylase carboxyltransferase subunit alpha
    • acetyl-coa carboxylase biotin carboxyl carrier protein
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle:
    • 4 reactions found over 18 reactions in the full pathway
  • PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast):
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-5744, glyoxylate assimilation:
    • 2 reactions found over 13 reactions in the full pathway
  • PWY-6679, jadomycin biosynthesis:
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-4381, fatty acid biosynthesis initiation I:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5743, 3-hydroxypropanoate cycle:
    • 2 reactions found over 13 reactions in the full pathway
  • PWY-6722, candicidin biosynthesis:
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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