Difference between revisions of "ACETYL-COA-CARBOXYLTRANSFER-RXN"
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(Created page with "Category:reaction == Reaction RXN-18204 == * direction: ** reversible * common-name: ** 3-isopropylmalate dehydrogenase == Reaction formula == * 1 CPDQT-38[c] '''+'''...") |
(Created page with "Category:reaction == Reaction ACETYL-COA-CARBOXYLTRANSFER-RXN == * direction: ** left-to-right * common-name: ** acetyl-coa carboxylase biotin carboxyl carrier protein sub...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction ACETYL-COA-CARBOXYLTRANSFER-RXN == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
− | ** | + | ** acetyl-coa carboxylase biotin carboxyl carrier protein subunit |
+ | ** acetyl-coa carboxylase carboxyltransferase subunit beta | ||
+ | ** acetyl-coa carboxylase biotin carboxylase subunit | ||
+ | ** acetyl-coa carboxylase carboxyltransferase subunit alpha | ||
+ | ** acetyl-coa carboxylase biotin carboxyl carrier protein | ||
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/6.4.1.2 ec-6.4.1.2] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ACETYL-COA]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[RUMFLAFD1_RS0106650]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | *** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
− | * Gene: [[ | + | ** Category: [[orthology]] |
+ | *** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[RUMFLAFD1_RS0106630]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | *** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[RUMFLAFD1_RS0106640]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[RUMFLAFD1_RS0116920]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
+ | * Gene: [[RUMFLAFD1_RS0106645]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[RUMFLAFD1_RS0115990]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[RUMFLAFD1_RS0105330]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[ | + | * [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: |
− | ** ''' | + | ** '''4''' reactions found over '''18''' reactions in the full pathway |
+ | * [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): | ||
+ | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-5744]], glyoxylate assimilation: | ||
+ | ** '''2''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[PWY-6679]], jadomycin biosynthesis: | ||
+ | ** '''1''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-4381]], fatty acid biosynthesis initiation I: | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5743]], 3-hydroxypropanoate cycle: | ||
+ | ** '''2''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[PWY-6722]], candicidin biosynthesis: | ||
+ | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * RHEA: |
− | {{#set: common-name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11309 11309] |
− | {{#set: nb gene associated= | + | * LIGAND-RXN: |
− | {{#set: nb pathway associated= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00742 R00742] |
− | {{#set: reconstruction category=annotation}} | + | {{#set: direction=left-to-right}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: common-name=acetyl-coa carboxylase biotin carboxyl carrier protein|acetyl-coa carboxylase carboxyltransferase subunit alpha|acetyl-coa carboxylase biotin carboxyl carrier protein subunit|acetyl-coa carboxylase carboxyltransferase subunit beta|acetyl-coa carboxylase biotin carboxylase subunit}} |
+ | {{#set: ec-number=ec-6.4.1.2}} | ||
+ | {{#set: nb gene associated=7}} | ||
+ | {{#set: nb pathway associated=7}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=genome_a}} | + | {{#set: reconstruction source=output_pantograph_bifidobacteriumadolescentisl2-32|genome_a|output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014|output_pantograph_ecoli|output_pantograph_l_plantarum_wcfs1}} |
Latest revision as of 17:48, 15 January 2021
Contents
Reaction ACETYL-COA-CARBOXYLTRANSFER-RXN
- direction:
- left-to-right
- common-name:
- acetyl-coa carboxylase biotin carboxyl carrier protein subunit
- acetyl-coa carboxylase carboxyltransferase subunit beta
- acetyl-coa carboxylase biotin carboxylase subunit
- acetyl-coa carboxylase carboxyltransferase subunit alpha
- acetyl-coa carboxylase biotin carboxyl carrier protein
- ec-number:
Reaction formula
- 1 ACETYL-COA[c] + 1 ATP[c] + 1 HCO3[c] => 1 ADP[c] + 1 MALONYL-COA[c] + 1 PROTON[c] + 1 Pi[c]
Gene(s) associated with this reaction
- Gene: RUMFLAFD1_RS0106650
- Category: annotation
- Source: genome_a, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: orthology
- Source: output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ecoli, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_l_plantarum_wcfs1, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: RUMFLAFD1_RS0106630
- Category: annotation
- Source: genome_a, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: orthology
- Source: output_pantograph_ecoli, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_l_plantarum_wcfs1, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: RUMFLAFD1_RS0106640
- Category: annotation
- Source: genome_a, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: orthology
- Source: output_pantograph_bifidobacteriumadolescentisl2-32, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ecoli, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_l_plantarum_wcfs1, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: RUMFLAFD1_RS0116920
- Category: annotation
- Source: genome_a, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: annotation
- Gene: RUMFLAFD1_RS0106645
- Category: annotation
- Source: genome_a, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: orthology
- Source: output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ecoli, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_l_plantarum_wcfs1, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: RUMFLAFD1_RS0115990
- Category: orthology
- Source: output_pantograph_bifidobacteriumadolescentisl2-32, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: RUMFLAFD1_RS0105330
- Category: orthology
- Source: output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_l_plantarum_wcfs1, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle:
- 4 reactions found over 18 reactions in the full pathway
- PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast):
- 6 reactions found over 9 reactions in the full pathway
- PWY-5744, glyoxylate assimilation:
- 2 reactions found over 13 reactions in the full pathway
- PWY-6679, jadomycin biosynthesis:
- 1 reactions found over 9 reactions in the full pathway
- PWY-4381, fatty acid biosynthesis initiation I:
- 3 reactions found over 3 reactions in the full pathway
- PWY-5743, 3-hydroxypropanoate cycle:
- 2 reactions found over 13 reactions in the full pathway
- PWY-6722, candicidin biosynthesis:
- 1 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: annotation; source: genome_a; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ecoli; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_l_plantarum_wcfs1; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_bifidobacteriumadolescentisl2-32; tool: pantograph; comment: n.a
External links