Difference between revisions of "METHENYLTHFCYCLOHYDRO-RXN"

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(Created page with "Category:reaction == Reaction 4.2.2.2-RXN == * direction: ** reversible * common-name: ** pectate lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.2.2.2 ec-4.2.2.2] ==...")
 
(Created page with "Category:reaction == Reaction METHENYLTHFCYCLOHYDRO-RXN == * direction: ** reversible * common-name: ** bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrah...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 4.2.2.2-RXN ==
+
== Reaction METHENYLTHFCYCLOHYDRO-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** pectate lyase
+
** bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.2.2 ec-4.2.2.2]
+
** [http://enzyme.expasy.org/EC/3.5.4.9 ec-3.5.4.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PECTATE]][c] '''<=>''' n [[CPD-11244]][c]
+
* 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[RUMFLAFD1_RS0103215]]
+
* Gene: [[RUMFLAFD1_RS0105905]]
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0111605]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[P164-PWY]], purine nucleobases degradation I (anaerobic):
 +
** '''5''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-3841]], folate transformations II:
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis:
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria):
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-2201]], folate transformations I:
 +
** '''12''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-5030]], L-histidine degradation III:
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5497]], purine nucleobases degradation II (anaerobic):
 +
** '''9''' reactions found over '''24''' reactions in the full pathway
 +
* [[PWY-6613]], tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23703 23703]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02361 R02361]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01655 R01655]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P0C1A3 P0C1A3]
+
** [http://www.uniprot.org/uniprot/P09440 P09440]
−
** [http://www.uniprot.org/uniprot/Q04701 Q04701]
+
** [http://www.uniprot.org/uniprot/P07245 P07245]
−
** [http://www.uniprot.org/uniprot/P11431 P11431]
+
** [http://www.uniprot.org/uniprot/P11586 P11586]
−
** [http://www.uniprot.org/uniprot/P11430 P11430]
+
** [http://www.uniprot.org/uniprot/P18155 P18155]
−
** [http://www.uniprot.org/uniprot/O08454 O08454]
+
** [http://www.uniprot.org/uniprot/P44313 P44313]
−
** [http://www.uniprot.org/uniprot/Q9RP65 Q9RP65]
+
** [http://www.uniprot.org/uniprot/P47259 P47259]
−
** [http://www.uniprot.org/uniprot/Q9XDT1 Q9XDT1]
+
** [http://www.uniprot.org/uniprot/P13995 P13995]
−
** [http://www.uniprot.org/uniprot/Q51915 Q51915]
+
** [http://www.uniprot.org/uniprot/P54382 P54382]
−
** [http://www.uniprot.org/uniprot/P18209 P18209]
+
** [http://www.uniprot.org/uniprot/O67736 O67736]
−
** [http://www.uniprot.org/uniprot/P24396 P24396]
+
** [http://www.uniprot.org/uniprot/Q9JWI9 Q9JWI9]
−
** [http://www.uniprot.org/uniprot/Q04085 Q04085]
+
** [http://www.uniprot.org/uniprot/Q9PP68 Q9PP68]
−
** [http://www.uniprot.org/uniprot/Q04086 Q04086]
+
** [http://www.uniprot.org/uniprot/P24186 P24186]
−
** [http://www.uniprot.org/uniprot/Q59419 Q59419]
+
** [http://www.uniprot.org/uniprot/Q04448 Q04448]
−
** [http://www.uniprot.org/uniprot/Q59420 Q59420]
+
** [http://www.uniprot.org/uniprot/Q60006 Q60006]
−
** [http://www.uniprot.org/uniprot/P40972 P40972]
+
** [http://www.uniprot.org/uniprot/Q27772 Q27772]
−
** [http://www.uniprot.org/uniprot/P15722 P15722]
+
** [http://www.uniprot.org/uniprot/P51696 P51696]
−
** [http://www.uniprot.org/uniprot/Q47466 Q47466]
+
** [http://www.uniprot.org/uniprot/O68031 O68031]
−
** [http://www.uniprot.org/uniprot/P40973 P40973]
+
** [http://www.uniprot.org/uniprot/Q9ZTV0 Q9ZTV0]
−
** [http://www.uniprot.org/uniprot/P39116 P39116]
+
** [http://www.uniprot.org/uniprot/Q9X7F6 Q9X7F6]
−
** [http://www.uniprot.org/uniprot/Q43861 Q43861]
 
−
** [http://www.uniprot.org/uniprot/Q43862 Q43862]
 
−
** [http://www.uniprot.org/uniprot/Q00843 Q00843]
 
−
** [http://www.uniprot.org/uniprot/P0C1A7 P0C1A7]
 
−
** [http://www.uniprot.org/uniprot/O24159 O24159]
 
−
** [http://www.uniprot.org/uniprot/P15721 P15721]
 
−
** [http://www.uniprot.org/uniprot/Q40319 Q40319]
 
−
** [http://www.uniprot.org/uniprot/P11278 P11278]
 
−
** [http://www.uniprot.org/uniprot/P0C1A2 P0C1A2]
 
−
** [http://www.uniprot.org/uniprot/P11073 P11073]
 
−
** [http://www.uniprot.org/uniprot/P04960 P04960]
 
−
** [http://www.uniprot.org/uniprot/P14005 P14005]
 
−
** [http://www.uniprot.org/uniprot/P29171 P29171]
 
−
** [http://www.uniprot.org/uniprot/P04959 P04959]
 
−
** [http://www.uniprot.org/uniprot/P0C1A5 P0C1A5]
 
−
** [http://www.uniprot.org/uniprot/P0C1A4 P0C1A4]
 
 
</div>
 
</div>
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=pectate lyase}}
+
{{#set: common-name=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold}}
−
{{#set: ec-number=ec-4.2.2.2}}
+
{{#set: ec-number=ec-3.5.4.9}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=9}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=genome_a}}
 
{{#set: reconstruction source=genome_a}}

Latest revision as of 17:48, 15 January 2021

Reaction METHENYLTHFCYCLOHYDRO-RXN

  • direction:
    • reversible
  • common-name:
    • bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • P164-PWY, purine nucleobases degradation I (anaerobic):
    • 5 reactions found over 17 reactions in the full pathway
  • PWY-3841, folate transformations II:
    • 10 reactions found over 11 reactions in the full pathway
  • 1CMET2-PWY, N10-formyl-tetrahydrofolate biosynthesis:
    • 9 reactions found over 9 reactions in the full pathway
  • CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria):
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-1722, formate assimilation into 5,10-methylenetetrahydrofolate:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-2201, folate transformations I:
    • 12 reactions found over 12 reactions in the full pathway
  • PWY-5030, L-histidine degradation III:
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5497, purine nucleobases degradation II (anaerobic):
    • 9 reactions found over 24 reactions in the full pathway
  • PWY-6613, tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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