Difference between revisions of "RXN-14286"

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(Created page with "Category:reaction == Reaction RXN-9655 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86] ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:reaction == Reaction RXN-14286 == * direction: ** left-to-right * common-name: ** glycogen/starch/alpha-glucan family phosphorylase * ec-number: ** [http://enzyme...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-9655 ==
+
== Reaction RXN-14286 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** glycogen/starch/alpha-glucan family phosphorylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/2.4.1.1 ec-2.4.1.1]
−
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 
−
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 
−
* synonymous:
 
−
** d-3-hydroxydecanoyl-[acyl-carrier protein] dehydratase
 
−
** faba
 
−
** β-hydroxyacyl-acyl carrier protein dehydratase
 
−
** β-hydroxydecanoate dehydrase
 
−
** (3r)-3-hydroxydecanoyl-[acyl-carrier-protein] hydro-lyase
 
−
** β-hydroxydecanoyl thiol ester dehydrase
 
−
** hddase
 
−
** β-hydroxyacyl-acp dehydrase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Beta-hydroxydecanoyl-ACPs]][c] '''=>''' 1 [[Trans-D2-decenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[CPD0-1133]][c] '''+''' 1 [[Pi]][c] '''=>''' 1 [[GLC-1-P]][c] '''+''' 1 [[MALTOHEXAOSE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[RUMFLAFD1_RS0118835]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-862]], (5Z)-dodecenoate biosynthesis I:
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants):
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi):
 
−
** '''22''' reactions found over '''31''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-4.2.1.59|ec-2.3.1.85|ec-2.3.1.86}}
+
{{#set: common-name=glycogen/starch/alpha-glucan family phosphorylase}}
−
{{#set: synonymous=d-3-hydroxydecanoyl-[acyl-carrier protein] dehydratase|faba|β-hydroxyacyl-acp dehydrase|β-hydroxydecanoate dehydrase|β-hydroxyacyl-acyl carrier protein dehydratase|β-hydroxydecanoyl thiol ester dehydrase|(3r)-3-hydroxydecanoyl-[acyl-carrier-protein] hydro-lyase|hddase}}
+
{{#set: ec-number=ec-2.4.1.1}}
−
{{#set: nb gene associated=0}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome_a}}
+
{{#set: reconstruction source=output_pantograph_ecoli|output_pantograph_bifidobacteriumadolescentisl2-32|genome_a}}

Latest revision as of 17:49, 15 January 2021

Reaction RXN-14286

  • direction:
    • left-to-right
  • common-name:
    • glycogen/starch/alpha-glucan family phosphorylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//rflavgem/index.php?title=RXN-14286&oldid=12909"