Difference between revisions of "RXN-8763"

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(Created page with "Category:reaction == Reaction PROTOCATECHUATE-34-DIOXYGENASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.13.11.3 ec-1.13.11.3] == R...")
(Created page with "Category:reaction == Reaction RXN-8763 == * direction: ** left-to-right * common-name: ** cobalamin (vitamin b12) biosynthesis cbig protein * ec-number: ** [http://enzyme....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction PROTOCATECHUATE-34-DIOXYGENASE-RXN ==
+
== Reaction RXN-8763 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** cobalamin (vitamin b12) biosynthesis cbig protein
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.13.11.3 ec-1.13.11.3]
+
** [http://enzyme.expasy.org/EC/3.7.1.12 ec-3.7.1.12]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[3-4-DIHYDROXYBENZOATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-245]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[CPD-9042]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACETALD]][c] '''+''' 1 [[CPD-9047]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[RUMFLAFD1_RS0101430]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY]], protocatechuate degradation II (ortho-cleavage pathway):
+
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''6''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10085 10085]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26282 26282]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R01631 R01631]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07772 R07772]
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P15109 P15109]
 
** [http://www.uniprot.org/uniprot/P15110 P15110]
 
** [http://www.uniprot.org/uniprot/P20372 P20372]
 
** [http://www.uniprot.org/uniprot/P00436 P00436]
 
** [http://www.uniprot.org/uniprot/P00437 P00437]
 
** [http://www.uniprot.org/uniprot/Q05353 Q05353]
 
** [http://www.uniprot.org/uniprot/Q9ZFA1 Q9ZFA1]
 
** [http://www.uniprot.org/uniprot/Q9ZFA0 Q9ZFA0]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-1.13.11.3}}
+
{{#set: common-name=cobalamin (vitamin b12) biosynthesis cbig protein}}
{{#set: nb gene associated=0}}
+
{{#set: ec-number=ec-3.7.1.12}}
 +
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Latest revision as of 17:49, 15 January 2021

Reaction RXN-8763

  • direction:
    • left-to-right
  • common-name:
    • cobalamin (vitamin b12) biosynthesis cbig protein
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7377, cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
    • 6 reactions found over 15 reactions in the full pathway

Reconstruction information

External links