Difference between revisions of "3.4.21.92-RXN"

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(Created page with "Category:reaction == Reaction GLYRIBONUCSYN-RXN == * direction: ** left-to-right * common-name: ** phosphoribosylamine--glycine ligase * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction 3.4.21.92-RXN == * direction: ** left-to-right * common-name: ** atp-dependent clp protease clpa ** clp protease clpp ** atp-dependent clp pr...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLYRIBONUCSYN-RXN ==
+
== Reaction 3.4.21.92-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** phosphoribosylamine--glycine ligase
+
** atp-dependent clp protease clpa
 +
** clp protease clpp
 +
** atp-dependent clp protease proteolytic subunit clpp
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.4.13 ec-6.3.4.13]
+
** [http://enzyme.expasy.org/EC/3.4.21.92 ec-3.4.21.92]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[5-P-BETA-D-RIBOSYL-AMINE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[GLY]][c] '''=>''' 1 [[5-PHOSPHO-RIBOSYL-GLYCINEAMIDE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[RUMFLAFD1_RS0108660]]
+
* Gene: [[RUMFLAFD1_RS0105480]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0100140]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS23485]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0114380]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis:
 
−
** '''7''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II:
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I:
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17453 17453]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04144 R04144]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P07244 P07244]
+
** [http://www.uniprot.org/uniprot/P12208 P12208]
−
** [http://www.uniprot.org/uniprot/Q58347 Q58347]
+
** [http://www.uniprot.org/uniprot/Q9JU33 Q9JU33]
−
** [http://www.uniprot.org/uniprot/P12039 P12039]
+
** [http://www.uniprot.org/uniprot/Q9PE41 Q9PE41]
−
** [http://www.uniprot.org/uniprot/P21872 P21872]
+
** [http://www.uniprot.org/uniprot/P0A6G7 P0A6G7]
−
** [http://www.uniprot.org/uniprot/P15640 P15640]
+
** [http://www.uniprot.org/uniprot/P56156 P56156]
−
** [http://www.uniprot.org/uniprot/P00967 P00967]
+
** [http://www.uniprot.org/uniprot/P80244 P80244]
−
** [http://www.uniprot.org/uniprot/P16340 P16340]
+
** [http://www.uniprot.org/uniprot/O51556 O51556]
−
** [http://www.uniprot.org/uniprot/P22102 P22102]
+
** [http://www.uniprot.org/uniprot/O67357 O67357]
−
** [http://www.uniprot.org/uniprot/Q9JWU6 Q9JWU6]
+
** [http://www.uniprot.org/uniprot/O83520 O83520]
−
** [http://www.uniprot.org/uniprot/P43845 P43845]
+
** [http://www.uniprot.org/uniprot/Q9HYR9 Q9HYR9]
−
** [http://www.uniprot.org/uniprot/Q9PN47 Q9PN47]
+
** [http://www.uniprot.org/uniprot/P63783 P63783]
−
** [http://www.uniprot.org/uniprot/Q64737 Q64737]
+
** [http://www.uniprot.org/uniprot/O84712 O84712]
−
** [http://www.uniprot.org/uniprot/P20772 P20772]
+
** [http://www.uniprot.org/uniprot/P43867 P43867]
−
** [http://www.uniprot.org/uniprot/P26977 P26977]
+
** [http://www.uniprot.org/uniprot/O51698 O51698]
−
** [http://www.uniprot.org/uniprot/Q59492 Q59492]
+
** [http://www.uniprot.org/uniprot/P0A526 P0A526]
−
** [http://www.uniprot.org/uniprot/P74232 P74232]
+
** [http://www.uniprot.org/uniprot/Q9PLM0 Q9PLM0]
−
** [http://www.uniprot.org/uniprot/Q42804 Q42804]
+
** [http://www.uniprot.org/uniprot/Q9K709 Q9K709]
−
** [http://www.uniprot.org/uniprot/P52421 P52421]
+
** [http://www.uniprot.org/uniprot/Q9WZF9 Q9WZF9]
 +
** [http://www.uniprot.org/uniprot/Q9RSZ7 Q9RSZ7]
 +
** [http://www.uniprot.org/uniprot/Q9I2U1 Q9I2U1]
 +
** [http://www.uniprot.org/uniprot/Q9K888 Q9K888]
 +
** [http://www.uniprot.org/uniprot/P38002 P38002]
 +
** [http://www.uniprot.org/uniprot/Q9Z759 Q9Z759]
 +
** [http://www.uniprot.org/uniprot/Q9Z832 Q9Z832]
 +
** [http://www.uniprot.org/uniprot/P54413 P54413]
 +
** [http://www.uniprot.org/uniprot/Q9KQS6 Q9KQS6]
 +
** [http://www.uniprot.org/uniprot/Q9ZD29 Q9ZD29]
 +
** [http://www.uniprot.org/uniprot/Q9ZL50 Q9ZL50]
 +
** [http://www.uniprot.org/uniprot/P12209 P12209]
 +
** [http://www.uniprot.org/uniprot/Q7M2F6 Q7M2F6]
 +
** [http://www.uniprot.org/uniprot/P24064 P24064]
 +
** [http://www.uniprot.org/uniprot/P36387 P36387]
 +
** [http://www.uniprot.org/uniprot/P26567 P26567]
 +
** [http://www.uniprot.org/uniprot/P48883 P48883]
 +
** [http://www.uniprot.org/uniprot/Q16740 Q16740]
 +
** [http://www.uniprot.org/uniprot/P54416 P54416]
 +
** [http://www.uniprot.org/uniprot/Q59993 Q59993]
 +
** [http://www.uniprot.org/uniprot/P74467 P74467]
 +
** [http://www.uniprot.org/uniprot/P30063 P30063]
 +
** [http://www.uniprot.org/uniprot/Q36863 Q36863]
 +
** [http://www.uniprot.org/uniprot/Q42886 Q42886]
 +
** [http://www.uniprot.org/uniprot/P56317 P56317]
 +
** [http://www.uniprot.org/uniprot/P41609 P41609]
 +
** [http://www.uniprot.org/uniprot/Q9X7R9 Q9X7R9]
 +
** [http://www.uniprot.org/uniprot/O48931 O48931]
 
</div>
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=phosphoribosylamine--glycine ligase}}
+
{{#set: common-name=atp-dependent clp protease clpa|clp protease clpp|atp-dependent clp protease proteolytic subunit clpp}}
−
{{#set: ec-number=ec-6.3.4.13}}
+
{{#set: ec-number=ec-3.4.21.92}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ecoli|genome_a|output_pantograph_bifidobacteriumadolescentisl2-32|output_pantograph_l_plantarum_wcfs1}}
+
{{#set: reconstruction source=genome_a}}

Latest revision as of 17:49, 15 January 2021

Reaction 3.4.21.92-RXN

  • direction:
    • left-to-right
  • common-name:
    • atp-dependent clp protease clpa
    • clp protease clpp
    • atp-dependent clp protease proteolytic subunit clpp
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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