Difference between revisions of "2.5.1.19-RXN"

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(Created page with "Category:reaction == Reaction GLYCOPHOSPHORYL-RXN == * direction: ** reversible * common-name: ** glycogen/starch/alpha-glucan family phosphorylase * ec-number: ** [http:/...")
 
(Created page with "Category:reaction == Reaction 2.5.1.19-RXN == * direction: ** reversible * common-name: ** 3-phosphoshikimate 1-carboxyvinyltransferase * ec-number: ** [http://enzyme.expa...")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLYCOPHOSPHORYL-RXN ==
+
== Reaction 2.5.1.19-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** glycogen/starch/alpha-glucan family phosphorylase
+
** 3-phosphoshikimate 1-carboxyvinyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.1 ec-2.4.1.1]
+
** [http://enzyme.expasy.org/EC/2.5.1.19 ec-2.5.1.19]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Glycogens]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[CPD0-971]][c] '''+''' 1 [[GLC-1-P]][c]
+
* 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[SHIKIMATE-5P]][c] '''<=>''' 1 [[3-ENOLPYRUVYL-SHIKIMATE-5P]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[RUMFLAFD1_RS0118835]]
+
* Gene: [[RUMFLAFD1_RS0101775]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_bthetaiotaomicron_heinken2013]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5941]], glycogen degradation II:
+
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate:
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''6''' reactions found over '''5''' reactions in the full pathway
−
* [[GLYCOCAT-PWY]], glycogen degradation I:
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21259 21259]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03460 R03460]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P22299 P22299]
 +
** [http://www.uniprot.org/uniprot/P07547 P07547]
 +
** [http://www.uniprot.org/uniprot/P08566 P08566]
 +
** [http://www.uniprot.org/uniprot/P22487 P22487]
 +
** [http://www.uniprot.org/uniprot/P52312 P52312]
 +
** [http://www.uniprot.org/uniprot/Q9JTT3 Q9JTT3]
 +
** [http://www.uniprot.org/uniprot/Q03421 Q03421]
 +
** [http://www.uniprot.org/uniprot/P19786 P19786]
 +
** [http://www.uniprot.org/uniprot/P17688 P17688]
 +
** [http://www.uniprot.org/uniprot/P24497 P24497]
 +
** [http://www.uniprot.org/uniprot/P23981 P23981]
 +
** [http://www.uniprot.org/uniprot/P23281 P23281]
 +
** [http://www.uniprot.org/uniprot/Q04570 Q04570]
 +
** [http://www.uniprot.org/uniprot/P43905 P43905]
 +
** [http://www.uniprot.org/uniprot/Q59975 Q59975]
 +
** [http://www.uniprot.org/uniprot/P12421 P12421]
 +
** [http://www.uniprot.org/uniprot/P07637 P07637]
 +
** [http://www.uniprot.org/uniprot/P19688 P19688]
 +
** [http://www.uniprot.org/uniprot/P0A6D3 P0A6D3]
 +
** [http://www.uniprot.org/uniprot/P11043 P11043]
 +
</div>
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=glycogen/starch/alpha-glucan family phosphorylase}}
+
{{#set: common-name=3-phosphoshikimate 1-carboxyvinyltransferase}}
−
{{#set: ec-number=ec-2.4.1.1}}
+
{{#set: ec-number=ec-2.5.1.19}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome_a}}
+
{{#set: reconstruction source=genome_a|output_pantograph_bifidobacteriumadolescentisl2-32|output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014|output_pantograph_ecoli|output_pantograph_l_plantarum_wcfs1|output_pantograph_bthetaiotaomicron_heinken2013}}

Latest revision as of 17:49, 15 January 2021

Reaction 2.5.1.19-RXN

  • direction:
    • reversible
  • common-name:
    • 3-phosphoshikimate 1-carboxyvinyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate:
    • 6 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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