Difference between revisions of "3.1.11.6-RXN"

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(Created page with "Category:reaction == Reaction GALACTOKIN-RXN == * direction: ** reversible * common-name: ** galactokinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.6 ec-2.7.1.6]...")
 
(Created page with "Category:reaction == Reaction 3.1.11.6-RXN == * direction: ** left-to-right * common-name: ** exodeoxyribonuclease vii large subunit ** exodeoxyribonuclease vii small subu...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GALACTOKIN-RXN ==
+
== Reaction 3.1.11.6-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** galactokinase
+
** exodeoxyribonuclease vii large subunit
 +
** exodeoxyribonuclease vii small subunit
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.6 ec-2.7.1.6]
+
** [http://enzyme.expasy.org/EC/3.1.11.6 ec-3.1.11.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ALPHA-D-GALACTOSE]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[GALACTOSE-1P]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[Single-Stranded-DNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Ribonucleoside-Monophosphates]][c] '''+''' 1 [[SS-Oligodeoxyribonucleotides]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[RUMFLAFD1_RS0106330]]
+
* Gene: [[RUMFLAFD1_RS0103070]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0103065]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY66-422]], D-galactose degradation V (Leloir pathway):
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6317]], D-galactose degradation I (Leloir pathway):
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-3821]], D-galactose detoxification:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6527]], stachyose degradation:
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13556 13556]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01092 R01092]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P09608 P09608]
+
** [http://www.uniprot.org/uniprot/P43914 P43914]
−
** [http://www.uniprot.org/uniprot/Q01415 Q01415]
+
** [http://www.uniprot.org/uniprot/Q9PIH4 Q9PIH4]
−
** [http://www.uniprot.org/uniprot/P22713 P22713]
+
** [http://www.uniprot.org/uniprot/P43913 P43913]
−
** [http://www.uniprot.org/uniprot/P31767 P31767]
+
** [http://www.uniprot.org/uniprot/Q9JSM1 Q9JSM1]
−
** [http://www.uniprot.org/uniprot/Q8X7P4 Q8X7P4]
+
** [http://www.uniprot.org/uniprot/Q9CH84 Q9CH84]
−
** [http://www.uniprot.org/uniprot/Q9R7D7 Q9R7D7]
+
** [http://www.uniprot.org/uniprot/Q9CH83 Q9CH83]
−
** [http://www.uniprot.org/uniprot/P96993 P96993]
+
** [http://www.uniprot.org/uniprot/P0A8G9 P0A8G9]
−
** [http://www.uniprot.org/uniprot/P04385 P04385]
+
** [http://www.uniprot.org/uniprot/P04994 P04994]
−
** [http://www.uniprot.org/uniprot/P0A6T3 P0A6T3]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P13227 P13227]
+
{{#set: common-name=exodeoxyribonuclease vii small subunit|exodeoxyribonuclease vii large subunit}}
−
** [http://www.uniprot.org/uniprot/P39574 P39574]
+
{{#set: ec-number=ec-3.1.11.6}}
−
** [http://www.uniprot.org/uniprot/P13045 P13045]
+
{{#set: nb gene associated=2}}
−
** [http://www.uniprot.org/uniprot/Q9SEE5 Q9SEE5]
+
{{#set: nb pathway associated=0}}
−
{{#set: direction=reversible}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: common-name=galactokinase}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: ec-number=ec-2.7.1.6}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_bifidobacteriumadolescentisl2-32|genome_a|output_pantograph_ecoli}}
+
{{#set: reconstruction source=genome_a}}

Latest revision as of 17:50, 15 January 2021

Reaction 3.1.11.6-RXN

  • direction:
    • left-to-right
  • common-name:
    • exodeoxyribonuclease vii large subunit
    • exodeoxyribonuclease vii small subunit
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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