Difference between revisions of "ALAALAabc"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN == * direction: ** reversible * common-name: ** branched-chain amino acid aminotransferase * ec-number: **...")
 
(Created page with "Category:reaction == Reaction ALAALAabc == * direction: ** left-to-right * common-name: ** d-alanyl-d-alanine (daladala) transport via abc system == Reaction formula == *...")
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN ==
+
== Reaction ALAALAabc ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** branched-chain amino acid aminotransferase
+
** d-alanyl-d-alanine (daladala) transport via abc system
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.6.1.6 ec-2.6.1.6]
 
−
** [http://enzyme.expasy.org/EC/2.6.1.42 ec-2.6.1.42]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[LEU]][c] '''<=>''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[GLT]][c]
+
* 1.0 [[ATP]][c] '''+''' 1.0 [[D-ALA-D-ALA]][e] '''+''' 1.0 [[WATER]][c] '''=>''' 1.0 [[ADP]][c] '''+''' 1.0 [[D-ALA-D-ALA]][c] '''+''' 1.0 [[PROTON]][c] '''+''' 1.0 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[RUMFLAFD1_RS0118735]]
+
* Gene: [[RUMFLAFD1_RS0105390]]
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_bthetaiotaomicron_heinken2013]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[LEUSYN-PWY]], L-leucine biosynthesis:
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[LEU-DEG2-PWY]], L-leucine degradation I:
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7767]], L-leucine degradation IV (Stickland reaction):
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5076]], L-leucine degradation III:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18324 18324]
+
{{#set: common-name=d-alanyl-d-alanine (daladala) transport via abc system}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01090 R01090]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
 
−
** [http://www.uniprot.org/uniprot/P38891 P38891]
 
−
** [http://www.uniprot.org/uniprot/P47176 P47176]
 
−
** [http://www.uniprot.org/uniprot/O86505 O86505]
 
−
** [http://www.uniprot.org/uniprot/O14370 O14370]
 
−
** [http://www.uniprot.org/uniprot/O32954 O32954]
 
−
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=branched-chain amino acid aminotransferase}}
 
−
{{#set: ec-number=ec-2.6.1.6|ec-2.6.1.42}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_l_plantarum_wcfs1|output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014|output_pantograph_bthetaiotaomicron_heinken2013|output_pantograph_bifidobacteriumadolescentisl2-32|output_pantograph_ecoli|genome_a}}
+
{{#set: reconstruction source=output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014}}

Latest revision as of 17:50, 15 January 2021

Reaction ALAALAabc

  • direction:
    • left-to-right
  • common-name:
    • d-alanyl-d-alanine (daladala) transport via abc system

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//rflavgem/index.php?title=ALAALAabc&oldid=13299"