Difference between revisions of "RXN-14270"

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(Created page with "Category:reaction == Reaction 3.1.26.5-RXN == * direction: ** left-to-right * common-name: ** ribonuclease p protein component * ec-number: ** [http://enzyme.expasy.org/EC...")
 
(Created page with "Category:reaction == Reaction R344-RXN == * direction: ** left-to-right * common-name: ** atp--corrinoid adenosyltransferase btur/cobo/cobp * ec-number: ** [http://enzyme....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 3.1.26.5-RXN ==
+
== Reaction R344-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** ribonuclease p protein component
+
** atp--corrinoid adenosyltransferase btur/cobo/cobp
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.1.26.5 ec-3.1.26.5]
+
** [http://enzyme.expasy.org/EC/2.5.1.17 ec-2.5.1.17]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD0-2352]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-2353]][c] '''+''' 1 [[tRNA-fragment]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CPD-694]][c] '''=>''' 1 [[CPD-690]][c] '''+''' 1 [[P3I]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[RUMFLAFD1_RS0113530]]
+
* Gene: [[RUMFLAFD1_RS0105130]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY0-1479]], tRNA processing:
+
* [[PWY-5508]]:
** '''1''' reactions found over '''10''' reactions in the full pathway
+
** '''6''' reactions found over '''n.a''' reactions in the full pathway
 +
* [[PWY-5509]], adenosylcobalamin biosynthesis from adenosylcobinamide-GDP I:
 +
** '''6''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* UNIPROT:
+
* RHEA:
** [http://www.uniprot.org/uniprot/Q02773 Q02773]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11529 11529]
** [http://www.uniprot.org/uniprot/P41812 P41812]
+
* LIGAND-RXN:
** [http://www.uniprot.org/uniprot/P0A5X8 P0A5X8]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05220 R05220]
** [http://www.uniprot.org/uniprot/P48206 P48206]
 
** [http://www.uniprot.org/uniprot/Q9JW46 Q9JW46]
 
** [http://www.uniprot.org/uniprot/Q9PNX5 Q9PNX5]
 
** [http://www.uniprot.org/uniprot/Q9CJ73 Q9CJ73]
 
** [http://www.uniprot.org/uniprot/P29433 P29433]
 
** [http://www.uniprot.org/uniprot/P25817 P25817]
 
** [http://www.uniprot.org/uniprot/P22835 P22835]
 
** [http://www.uniprot.org/uniprot/P25814 P25814]
 
** [http://www.uniprot.org/uniprot/P0A7Y8 P0A7Y8]
 
** [http://www.uniprot.org/uniprot/Q55005 Q55005]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=ribonuclease p protein component}}
+
{{#set: common-name=atp--corrinoid adenosyltransferase btur/cobo/cobp}}
{{#set: ec-number=ec-3.1.26.5}}
+
{{#set: ec-number=ec-2.5.1.17}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=genome_a}}
 
{{#set: reconstruction source=genome_a}}

Revision as of 18:49, 23 November 2020

Reaction R344-RXN

  • direction:
    • left-to-right
  • common-name:
    • atp--corrinoid adenosyltransferase btur/cobo/cobp
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5508:
    • 6 reactions found over n.a reactions in the full pathway
  • PWY-5509, adenosylcobalamin biosynthesis from adenosylcobinamide-GDP I:
    • 6 reactions found over 3 reactions in the full pathway

Reconstruction information

External links