Difference between revisions of "SPERMACTRAN-RXN"
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(Created page with "Category:reaction == Reaction ARACHIDONATE-5-LIPOXYGENASE-RXN == * direction: ** left-to-right * common-name: ** lta synthase family protein * synonymous: ** leukotriene-a...") |
(Created page with "Category:reaction == Reaction PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN == * direction: ** left-to-right * common-name: ** pyruvate, phosphate dikinase * ec-number: ** [http://e...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** pyruvate, phosphate dikinase |
− | * | + | * ec-number: |
− | ** | + | ** [http://enzyme.expasy.org/EC/2.7.9.1 ec-2.7.9.1] |
− | |||
− | |||
− | |||
− | |||
− | |||
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− | |||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[Pi]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[RUMFLAFD1_RS0106140]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | *** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_bthetaiotaomicron_heinken2013]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[ | + | * [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: |
− | ** ''' | + | ** '''3''' reactions found over '''6''' reactions in the full pathway |
+ | * [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: | ||
+ | ** '''8''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-6549]], L-glutamine biosynthesis III: | ||
+ | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: | ||
+ | ** '''7''' reactions found over '''12''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10756 10756] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00206 R00206] |
* UNIPROT: | * UNIPROT: | ||
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q7M0I6 Q7M0I6] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O23404 O23404] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q9WYA9 Q9WYA9] |
+ | ** [http://www.uniprot.org/uniprot/P22983 P22983] | ||
+ | ** [http://www.uniprot.org/uniprot/Q41846 Q41846] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42367 Q42367] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42368 Q42368] | ||
+ | ** [http://www.uniprot.org/uniprot/P22221 P22221] | ||
+ | ** [http://www.uniprot.org/uniprot/P37213 P37213] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42736 Q42736] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42910 Q42910] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39734 Q39734] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39735 Q39735] | ||
+ | ** [http://www.uniprot.org/uniprot/O24612 O24612] | ||
+ | ** [http://www.uniprot.org/uniprot/O85840 O85840] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=pyruvate, phosphate dikinase}} |
− | {{#set: | + | {{#set: ec-number=ec-2.7.9.1}} |
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=genome_a}} | + | {{#set: reconstruction source=genome_a|output_pantograph_bthetaiotaomicron_heinken2013|output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014}} |
Revision as of 18:49, 23 November 2020
Contents
Reaction PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN
- direction:
- left-to-right
- common-name:
- pyruvate, phosphate dikinase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 PYRUVATE[c] + 1 Pi[c] => 1 AMP[c] + 1 PHOSPHO-ENOL-PYRUVATE[c] + 1 PPI[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: RUMFLAFD1_RS0106140
- Category: annotation
- Source: genome_a, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: orthology
- Source: output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_bthetaiotaomicron_heinken2013, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-241, C4 photosynthetic carbon assimilation cycle, NADP-ME type:
- 3 reactions found over 6 reactions in the full pathway
- PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type:
- 8 reactions found over 10 reactions in the full pathway
- PWY-6549, L-glutamine biosynthesis III:
- 6 reactions found over 9 reactions in the full pathway
- PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type:
- 7 reactions found over 12 reactions in the full pathway
Reconstruction information
- category: annotation; source: genome_a; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_bthetaiotaomicron_heinken2013; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014; tool: pantograph; comment: n.a
External links