Difference between revisions of "SPERMACTRAN-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction ARACHIDONATE-5-LIPOXYGENASE-RXN == * direction: ** left-to-right * common-name: ** lta synthase family protein * synonymous: ** leukotriene-a...")
 
(Created page with "Category:reaction == Reaction PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN == * direction: ** left-to-right * common-name: ** pyruvate, phosphate dikinase * ec-number: ** [http://e...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction ARACHIDONATE-5-LIPOXYGENASE-RXN ==
+
== Reaction PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** lta synthase family protein
+
** pyruvate, phosphate dikinase
* synonymous:
+
* ec-number:
** leukotriene-a4 synthase
+
** [http://enzyme.expasy.org/EC/2.7.9.1 ec-2.7.9.1]
** 5δ-lipoxygenase
 
** arachidonic 5-lipoxygenase
 
** lta synthase
 
** leukotriene a4 synthase
 
** δ5-lipoxygenase
 
** arachidonic acid 5-lipoxygenase
 
** c-5-lipoxygenase
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ARACHIDONIC_ACID]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[6E8Z11Z14Z-5S-5-HYDROPEROXYCOSA-6]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[Pi]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[RUMFLAFD1_RS0119795]]
+
* Gene: [[RUMFLAFD1_RS0106140]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_bthetaiotaomicron_heinken2013]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY66-375]], leukotriene biosynthesis:
+
* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type:
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type:
 +
** '''8''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6549]], L-glutamine biosynthesis III:
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type:
 +
** '''7''' reactions found over '''12''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17486 17486]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10756 10756]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R01595 R01595]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00206 R00206]
 
* UNIPROT:
 
* UNIPROT:
** [http://www.uniprot.org/uniprot/P12527 P12527]
+
** [http://www.uniprot.org/uniprot/Q7M0I6 Q7M0I6]
** [http://www.uniprot.org/uniprot/P09917 P09917]
+
** [http://www.uniprot.org/uniprot/O23404 O23404]
** [http://www.uniprot.org/uniprot/Q7M0C1 Q7M0C1]
+
** [http://www.uniprot.org/uniprot/Q9WYA9 Q9WYA9]
 +
** [http://www.uniprot.org/uniprot/P22983 P22983]
 +
** [http://www.uniprot.org/uniprot/Q41846 Q41846]
 +
** [http://www.uniprot.org/uniprot/Q42367 Q42367]
 +
** [http://www.uniprot.org/uniprot/Q42368 Q42368]
 +
** [http://www.uniprot.org/uniprot/P22221 P22221]
 +
** [http://www.uniprot.org/uniprot/P37213 P37213]
 +
** [http://www.uniprot.org/uniprot/Q42736 Q42736]
 +
** [http://www.uniprot.org/uniprot/Q42910 Q42910]
 +
** [http://www.uniprot.org/uniprot/Q39734 Q39734]
 +
** [http://www.uniprot.org/uniprot/Q39735 Q39735]
 +
** [http://www.uniprot.org/uniprot/O24612 O24612]
 +
** [http://www.uniprot.org/uniprot/O85840 O85840]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=lta synthase family protein}}
+
{{#set: common-name=pyruvate, phosphate dikinase}}
{{#set: synonymous=leukotriene a4 synthase|leukotriene-a4 synthase|arachidonic 5-lipoxygenase|lta synthase|c-5-lipoxygenase|arachidonic acid 5-lipoxygenase|5&delta;-lipoxygenase|&delta;5-lipoxygenase}}
+
{{#set: ec-number=ec-2.7.9.1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=genome_a}}
+
{{#set: reconstruction source=genome_a|output_pantograph_bthetaiotaomicron_heinken2013|output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014}}

Revision as of 18:49, 23 November 2020

Reaction PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • pyruvate, phosphate dikinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-241, C4 photosynthetic carbon assimilation cycle, NADP-ME type:
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type:
    • 8 reactions found over 10 reactions in the full pathway
  • PWY-6549, L-glutamine biosynthesis III:
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type:
    • 7 reactions found over 12 reactions in the full pathway

Reconstruction information

External links