Difference between revisions of "GLYCOGEN-BRANCH-RXN"

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(Created page with "Category:reaction == Reaction ADENYLATECYC-RXN == * direction: ** left-to-right * common-name: ** adenylate cyclase * ec-number: ** [http://enzyme.expasy.org/EC/4.6.1.1 ec...")
 
(Created page with "Category:reaction == Reaction DIAMINOPIMELATE-DEHYDROGENASE-RXN == * direction: ** reversible * common-name: ** diaminopimelate dehydrogenase * ec-number: ** [http://enzym...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ADENYLATECYC-RXN ==
+
== Reaction DIAMINOPIMELATE-DEHYDROGENASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** adenylate cyclase
+
** diaminopimelate dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.6.1.1 ec-4.6.1.1]
+
** [http://enzyme.expasy.org/EC/1.4.1.16 ec-1.4.1.16]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''=>''' 1 [[CAMP]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[MESO-DIAMINOPIMELATE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[L-ALPHA-AMINO-EPSILON-KETO-PIMELATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[RUMFLAFD1_RS0115925]]
+
* Gene: [[RUMFLAFD1_RS0112175]]
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[RUMFLAFD1_RS0116365]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-2942]], L-lysine biosynthesis III:
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15390 15390]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13564 13564]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00089 R00089]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02755 R02755]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P14605 P14605]
+
** [http://www.uniprot.org/uniprot/P04964 P04964]
−
** [http://www.uniprot.org/uniprot/Q05766 Q05766]
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/P21932 P21932]
+
{{#set: common-name=diaminopimelate dehydrogenase}}
−
** [http://www.uniprot.org/uniprot/P19754 P19754]
+
{{#set: ec-number=ec-1.4.1.16}}
−
** [http://www.uniprot.org/uniprot/P26769 P26769]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P26770 P26770]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/Q03343 Q03343]
 
−
** [http://www.uniprot.org/uniprot/Q01341 Q01341]
 
−
** [http://www.uniprot.org/uniprot/P40134 P40134]
 
−
** [http://www.uniprot.org/uniprot/P40146 P40146]
 
−
** [http://www.uniprot.org/uniprot/P51829 P51829]
 
−
** [http://www.uniprot.org/uniprot/P49606 P49606]
 
−
** [http://www.uniprot.org/uniprot/P0A1A7 P0A1A7]
 
−
** [http://www.uniprot.org/uniprot/P19485 P19485]
 
−
** [http://www.uniprot.org/uniprot/Q03100 Q03100]
 
−
** [http://www.uniprot.org/uniprot/P32870 P32870]
 
−
** [http://www.uniprot.org/uniprot/Q08462 Q08462]
 
−
** [http://www.uniprot.org/uniprot/P43524 P43524]
 
−
** [http://www.uniprot.org/uniprot/Q44561 Q44561]
 
−
** [http://www.uniprot.org/uniprot/P51830 P51830]
 
−
** [http://www.uniprot.org/uniprot/Q01513 Q01513]
 
−
** [http://www.uniprot.org/uniprot/P40136 P40136]
 
−
** [http://www.uniprot.org/uniprot/P15318 P15318]
 
−
** [http://www.uniprot.org/uniprot/P08678 P08678]
 
−
** [http://www.uniprot.org/uniprot/P23466 P23466]
 
−
** [http://www.uniprot.org/uniprot/P00936 P00936]
 
−
** [http://www.uniprot.org/uniprot/P27580 P27580]
 
−
** [http://www.uniprot.org/uniprot/P40145 P40145]
 
−
** [http://www.uniprot.org/uniprot/P26338 P26338]
 
−
** [http://www.uniprot.org/uniprot/P40130 P40130]
 
−
** [http://www.uniprot.org/uniprot/P30528 P30528]
 
−
** [http://www.uniprot.org/uniprot/Q9QW33 Q9QW33]
 
−
** [http://www.uniprot.org/uniprot/P72951 P72951]
 
−
** [http://www.uniprot.org/uniprot/P40138 P40138]
 
−
** [http://www.uniprot.org/uniprot/Q9VW60 Q9VW60]
 
−
** [http://www.uniprot.org/uniprot/O96306 O96306]
 
−
** [http://www.uniprot.org/uniprot/Q9Z286 Q9Z286]
 
−
** [http://www.uniprot.org/uniprot/O76229 O76229]
 
−
** [http://www.uniprot.org/uniprot/O77079 O77079]
 
−
** [http://www.uniprot.org/uniprot/O96762 O96762]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=adenylate cyclase}}
 
−
{{#set: ec-number=ec-4.6.1.1}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=0}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=genome_a}}
 
{{#set: reconstruction source=genome_a}}

Revision as of 18:49, 23 November 2020

Reaction DIAMINOPIMELATE-DEHYDROGENASE-RXN

  • direction:
    • reversible
  • common-name:
    • diaminopimelate dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2942, L-lysine biosynthesis III:
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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