Difference between revisions of "CU2abcpp"

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(Created page with "Category:reaction == Reaction ABC-28-RXN == * direction: ** left-to-right == Reaction formula == * 1 ATP[c] '''+''' 1 D-Ribopyranose[e] '''+''' 1 WATER[c] '''=...")
 
(Created page with "Category:reaction == Reaction RXN-14014 == * direction: ** left-to-right * common-name: ** 4-hydroxy-tetrahydrodipicolinate reductase * ec-number: ** [http://enzyme.expasy...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction ABC-28-RXN ==
+
== Reaction RXN-14014 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 4-hydroxy-tetrahydrodipicolinate reductase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.17.1.8 ec-1.17.1.8]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[D-Ribopyranose]][e] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[D-Ribopyranose]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[CPD-14443]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[RUMFLAFD1_RS0111655]]
+
* Gene: [[RUMFLAFD1_RS0118970]]
** Category: [[orthology]]
+
** Category: [[annotation]]
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
* Gene: [[RUMFLAFD1_RS0111660]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[RUMFLAFD1_RS0111650]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[RUMFLAFD1_RS0111665]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-2941]], L-lysine biosynthesis II:
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5097]], L-lysine biosynthesis VI:
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-2942]], L-lysine biosynthesis III:
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=35333 35333]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04199 R04199]
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04198 R04198]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=4}}
+
{{#set: common-name=4-hydroxy-tetrahydrodipicolinate reductase}}
{{#set: nb pathway associated=0}}
+
{{#set: ec-number=ec-1.17.1.8}}
{{#set: reconstruction category=orthology}}
+
{{#set: nb gene associated=1}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: nb pathway associated=4}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_ecoli}}
+
{{#set: reconstruction source=genome_a}}

Revision as of 18:50, 23 November 2020

Reaction RXN-14014

  • direction:
    • left-to-right
  • common-name:
    • 4-hydroxy-tetrahydrodipicolinate reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2941, L-lysine biosynthesis II:
    • 6 reactions found over 9 reactions in the full pathway
  • DAPLYSINESYN-PWY, L-lysine biosynthesis I:
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-5097, L-lysine biosynthesis VI:
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-2942, L-lysine biosynthesis III:
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links