Difference between revisions of "RXN-14286"

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(Created page with "Category:reaction == Reaction RXN-9655 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86] ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:reaction == Reaction RXN-14246 == * direction: ** reversible * common-name: ** diaminopimelate dehydrogenase == Reaction formula == * 1 MESO-DIAMINOPIMELATE[c...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-9655 ==
+
== Reaction RXN-14246 ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* ec-number:
+
* common-name:
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
+
** diaminopimelate dehydrogenase
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 
* synonymous:
 
** d-3-hydroxydecanoyl-[acyl-carrier protein] dehydratase
 
** faba
 
** β-hydroxyacyl-acyl carrier protein dehydratase
 
** β-hydroxydecanoate dehydrase
 
** (3r)-3-hydroxydecanoyl-[acyl-carrier-protein] hydro-lyase
 
** β-hydroxydecanoyl thiol ester dehydrase
 
** hddase
 
** β-hydroxyacyl-acp dehydrase
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Beta-hydroxydecanoyl-ACPs]][c] '''=>''' 1 [[Trans-D2-decenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[MESO-DIAMINOPIMELATE]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[RUMFLAFD1_RS0112175]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY0-862]], (5Z)-dodecenoate biosynthesis I:
 
** '''3''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants):
 
** '''31''' reactions found over '''31''' reactions in the full pathway
 
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi):
 
** '''22''' reactions found over '''31''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
{{#set: direction=left-to-right}}
+
* RHEA:
{{#set: ec-number=ec-4.2.1.59|ec-2.3.1.85|ec-2.3.1.86}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32257 32257]
{{#set: synonymous=d-3-hydroxydecanoyl-[acyl-carrier protein] dehydratase|faba|&beta;-hydroxyacyl-acp dehydrase|&beta;-hydroxydecanoate dehydrase|&beta;-hydroxyacyl-acyl carrier protein dehydratase|&beta;-hydroxydecanoyl thiol ester dehydrase|(3r)-3-hydroxydecanoyl-[acyl-carrier-protein] hydro-lyase|hddase}}
+
{{#set: direction=reversible}}
{{#set: nb gene associated=0}}
+
{{#set: common-name=diaminopimelate dehydrogenase}}
{{#set: nb pathway associated=3}}
+
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=genome_a}}
 
{{#set: reconstruction source=genome_a}}

Revision as of 18:50, 23 November 2020

Reaction RXN-14246

  • direction:
    • reversible
  • common-name:
    • diaminopimelate dehydrogenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links