Difference between revisions of "COBINAMIDEKIN-RXN"

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(Created page with "Category:reaction == Reaction 3.6.3.35-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.6.3.35 ec-3.6.3.35] == Reaction formula == * 1 [...")
 
(Created page with "Category:reaction == Reaction PGLYCDEHYDROG-RXN == * direction: ** reversible * common-name: ** 3-phosphoglycerate dehydrogenase * ec-number: ** [http://enzyme.expasy.org/...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.6.3.35-RXN ==
+
== Reaction PGLYCDEHYDROG-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** 3-phosphoglycerate dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.6.3.35 ec-3.6.3.35]
+
** [http://enzyme.expasy.org/EC/1.1.1.95 ec-1.1.1.95]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[MN+2]][e] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[MN+2]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[G3P]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[3-P-HYDROXYPYRUVATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[RUMFLAFD1_RS0101565]]
+
* Gene: [[RUMFLAFD1_RS0118915]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0101105]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[SERSYN-PWY]], L-serine biosynthesis I:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17366 17366]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12644 12644]
−
{{#set: direction=left-to-right}}
+
* LIGAND-RXN:
−
{{#set: ec-number=ec-3.6.3.35}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01513 R01513]
−
{{#set: nb gene associated=1}}
+
* UNIPROT:
−
{{#set: nb pathway associated=0}}
+
** [http://www.uniprot.org/uniprot/Q58424 Q58424]
−
{{#set: reconstruction category=orthology}}
+
** [http://www.uniprot.org/uniprot/P43885 P43885]
−
{{#set: reconstruction tool=pantograph}}
+
** [http://www.uniprot.org/uniprot/P35136 P35136]
 +
** [http://www.uniprot.org/uniprot/Q9PP40 Q9PP40]
 +
** [http://www.uniprot.org/uniprot/P0A9T0 P0A9T0]
 +
** [http://www.uniprot.org/uniprot/P40510 P40510]
 +
** [http://www.uniprot.org/uniprot/P40054 P40054]
 +
** [http://www.uniprot.org/uniprot/O49485 O49485]
 +
** [http://www.uniprot.org/uniprot/P87228 P87228]
 +
** [http://www.uniprot.org/uniprot/O04130 O04130]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=3-phosphoglycerate dehydrogenase}}
 +
{{#set: ec-number=ec-1.1.1.95}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_l_plantarum_wcfs1}}
+
{{#set: reconstruction source=output_pantograph_ecoli|output_pantograph_bifidobacteriumadolescentisl2-32|genome_a|output_pantograph_l_plantarum_wcfs1}}

Revision as of 18:51, 23 November 2020

Reaction PGLYCDEHYDROG-RXN

  • direction:
    • reversible
  • common-name:
    • 3-phosphoglycerate dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • SERSYN-PWY, L-serine biosynthesis I:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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