Difference between revisions of "ExchangeSeed-COB-I-ALAMIN"

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(Created page with "Category:reaction == Reaction RXN-18205 == * direction: ** left-to-right == Reaction formula == * 1 CPD-19489[c] '''+''' 1 PROTON[c] '''=>''' 1 CARBON-DIOXIDE[...")
 
(Created page with "Category:reaction == Reaction ATPSYN-RXN == * direction: ** reversible * common-name: ** atp synthase f1 subunit gamma ** f0f1 atp synthase subunit a ** atp synthase f0 su...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-18205 ==
+
== Reaction ATPSYN-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** atp synthase f1 subunit gamma
 +
** f0f1 atp synthase subunit a
 +
** atp synthase f0 subunit b
 +
** atp synthase f0 subunit c
 +
** atp synthase f1 subunit epsilon
 +
** f0f1 atp synthase subunit beta
 +
** f0f1 atp synthase subunit alpha
 +
** v-type atp synthase subunit i
 +
** v-type atp synthase subunit f
 +
** h+-transporting two-sector atpase subunit e
 +
** v-type atp synthase subunit k
 +
** v-type atp synthase subunit d
 +
** v-type atp synthase subunit b
 +
** v-type atp synthase subunit a
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/3.6.3.14 ec-3.6.3.14]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-19489]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPDQT-29]][c]
+
* 1 [[ADP]][c] '''+''' 4 [[PROTON]][e] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[ATP]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[RUMFLAFD1_RS0108915]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0107515]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0107505]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0107525]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0106670]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0108925]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0106680]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0106675]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0108935]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0107535]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0106685]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0108920]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0107500]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0107510]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0106665]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0107530]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0108910]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0108905]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0108930]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0108900]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWYQT-4450]], aliphatic glucosinolate biosynthesis, side chain elongation cycle:
+
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis:
−
** '''10''' reactions found over '''30''' reactions in the full pathway
+
** '''4''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=0}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00086 R00086]
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20855 20855]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=v-type atp synthase subunit k|h+-transporting two-sector atpase subunit e|f0f1 atp synthase subunit alpha|v-type atp synthase subunit a|v-type atp synthase subunit f|atp synthase f1 subunit epsilon|v-type atp synthase subunit d|atp synthase f0 subunit c|v-type atp synthase subunit i|atp synthase f0 subunit b|atp synthase f1 subunit gamma|f0f1 atp synthase subunit a|v-type atp synthase subunit b|f0f1 atp synthase subunit beta}}
 +
{{#set: ec-number=ec-3.6.3.14}}
 +
{{#set: nb gene associated=20}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Revision as of 18:51, 23 November 2020

Reaction ATPSYN-RXN

  • direction:
    • reversible
  • common-name:
    • atp synthase f1 subunit gamma
    • f0f1 atp synthase subunit a
    • atp synthase f0 subunit b
    • atp synthase f0 subunit c
    • atp synthase f1 subunit epsilon
    • f0f1 atp synthase subunit beta
    • f0f1 atp synthase subunit alpha
    • v-type atp synthase subunit i
    • v-type atp synthase subunit f
    • h+-transporting two-sector atpase subunit e
    • v-type atp synthase subunit k
    • v-type atp synthase subunit d
    • v-type atp synthase subunit b
    • v-type atp synthase subunit a
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7219, adenosine ribonucleotides de novo biosynthesis:
    • 4 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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