Difference between revisions of "DNA-DIRECTED-RNA-POLYMERASE-RXN"

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(Created page with "Category:reaction == Reaction NACGLCTRANS-RXN == * direction: ** reversible * common-name: ** udp-n-acetyl-d-glucosamine:n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diam...")
 
(Created page with "Category:reaction == Reaction RXN-11592 == * direction: ** left-to-right * common-name: ** 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh * ec-number: ** [http...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction NACGLCTRANS-RXN ==
+
== Reaction RXN-11592 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** udp-n-acetyl-d-glucosamine:n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine-diphosphoundecaprenol 4-β-n-acetylglucosaminlytransferase
+
** 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh
−
** undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.227 ec-2.4.1.227]
+
** [http://enzyme.expasy.org/EC/2.1.1.177 ec-2.1.1.177]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[C5]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''<=>''' 1 [[C6]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[23S-rRNA-pseudouridine1915]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[23S-rRNA-N3-methylpseudouridine1915]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[RUMFLAFD1_RS0113750]]
+
* Gene: [[RUMFLAFD1_RS0119535]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[RUMFLAFD1_RS0114925]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PEPTIDOGLYCANSYN-PWY]], peptidoglycan biosynthesis I (meso-diaminopimelate containing):
 
−
** '''3''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31230 31230]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42753 42753]
−
* LIGAND-RXN:
+
{{#set: direction=left-to-right}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R05032 R05032]
+
{{#set: common-name=23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh}}
−
{{#set: direction=reversible}}
+
{{#set: ec-number=ec-2.1.1.177}}
−
{{#set: common-name=undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase|udp-n-acetyl-d-glucosamine:n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine-diphosphoundecaprenol 4-&beta;-n-acetylglucosaminlytransferase}}
+
{{#set: nb gene associated=2}}
−
{{#set: ec-number=ec-2.4.1.227}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=1}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=genome_a}}
 
{{#set: reconstruction source=genome_a}}

Revision as of 18:51, 23 November 2020

Reaction RXN-11592

  • direction:
    • left-to-right
  • common-name:
    • 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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