Difference between revisions of "ALAALAabc"

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(Created page with "Category:reaction == Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN == * direction: ** reversible * common-name: ** branched-chain amino acid aminotransferase * ec-number: **...")
 
(Created page with "Category:reaction == Reaction ACETATE--COA-LIGASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.1 ec-6.2.1.1] == Reaction formula...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN ==
+
== Reaction ACETATE--COA-LIGASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** branched-chain amino acid aminotransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.6 ec-2.6.1.6]
+
** [http://enzyme.expasy.org/EC/6.2.1.1 ec-6.2.1.1]
−
** [http://enzyme.expasy.org/EC/2.6.1.42 ec-2.6.1.42]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[LEU]][c] '''<=>''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[GLT]][c]
+
* 1 [[ACET]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[RUMFLAFD1_RS0118735]]
+
* Gene: [[RUMFLAFD1_RS0117380]]
−
** Category: [[annotation]]
 
−
*** Source: [[genome_a]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_bifidobacteriumadolescentisl2-32]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_bthetaiotaomicron_heinken2013]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_l_plantarum_wcfs1]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[LEUSYN-PWY]], L-leucine biosynthesis:
+
* [[PWY66-21]], ethanol degradation II:
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[LEU-DEG2-PWY]], L-leucine degradation I:
+
* [[PWY-7118]], chitin degradation to ethanol:
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7767]], L-leucine degradation IV (Stickland reaction):
+
* [[PWY66-162]], ethanol degradation IV:
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5076]], L-leucine degradation III:
 
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY0-1313]], acetate conversion to acetyl-CoA:
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY66-161]], ethanol degradation III:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6672]], cis-genanyl-CoA degradation:
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18324 18324]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23176 23176]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01090 R01090]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00235 R00235]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
+
** [http://www.uniprot.org/uniprot/P27095 P27095]
−
** [http://www.uniprot.org/uniprot/P38891 P38891]
+
** [http://www.uniprot.org/uniprot/P31638 P31638]
−
** [http://www.uniprot.org/uniprot/P47176 P47176]
+
** [http://www.uniprot.org/uniprot/Q12662 Q12662]
−
** [http://www.uniprot.org/uniprot/O86505 O86505]
+
** [http://www.uniprot.org/uniprot/P28812 P28812]
−
** [http://www.uniprot.org/uniprot/O14370 O14370]
+
** [http://www.uniprot.org/uniprot/P27550 P27550]
−
** [http://www.uniprot.org/uniprot/O32954 O32954]
+
** [http://www.uniprot.org/uniprot/O34613 O34613]
−
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
+
** [http://www.uniprot.org/uniprot/Q9PMD2 Q9PMD2]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/P36333 P36333]
−
{{#set: common-name=branched-chain amino acid aminotransferase}}
+
** [http://www.uniprot.org/uniprot/Q01574 Q01574]
−
{{#set: ec-number=ec-2.6.1.6|ec-2.6.1.42}}
+
** [http://www.uniprot.org/uniprot/P39062 P39062]
 +
** [http://www.uniprot.org/uniprot/Q01576 Q01576]
 +
** [http://www.uniprot.org/uniprot/P52910 P52910]
 +
** [http://www.uniprot.org/uniprot/Q55404 Q55404]
 +
** [http://www.uniprot.org/uniprot/P16928 P16928]
 +
** [http://www.uniprot.org/uniprot/P16929 P16929]
 +
** [http://www.uniprot.org/uniprot/O68040 O68040]
 +
** [http://www.uniprot.org/uniprot/P78773 P78773]
 +
</div>
 +
{{#set: direction=left-to-right}}
 +
{{#set: ec-number=ec-6.2.1.1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=6}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_l_plantarum_wcfs1|output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014|output_pantograph_bthetaiotaomicron_heinken2013|output_pantograph_bifidobacteriumadolescentisl2-32|output_pantograph_ecoli|genome_a}}
+
{{#set: reconstruction source=output_pantograph_ecoli}}

Revision as of 18:51, 23 November 2020

Reaction ACETATE--COA-LIGASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-21, ethanol degradation II:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7118, chitin degradation to ethanol:
    • 4 reactions found over 6 reactions in the full pathway
  • PWY66-162, ethanol degradation IV:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY0-1313, acetate conversion to acetyl-CoA:
    • 1 reactions found over 1 reactions in the full pathway
  • PWY66-161, ethanol degradation III:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6672, cis-genanyl-CoA degradation:
    • 1 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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