Difference between revisions of "RUMFLAFD1 RS0110985"
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(Created page with "Category:gene == Gene RUMFLAFD1_RS0100795 == * right-end-position: ** 14998 * transcription-direction: ** positive * left-end-position: ** 13379 * centisome-position: ** 4...") |
(Created page with "Category:gene == Gene RUMFLAFD1_RS0110985 == * right-end-position: ** 40391 * transcription-direction: ** positive * left-end-position: ** 39738 * common-name: ** rpe * ce...") |
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| (One intermediate revision by one other user not shown) | |||
| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene RUMFLAFD1_RS0110985 == |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 40391 |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 39738 |
| + | * common-name: | ||
| + | ** rpe | ||
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 53.100117 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
| − | * [[ | + | * [[Ruminococcus_23112020]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[RIBULP3EPIM-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: right-end-position= | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[P122-PWY]] | ||
| + | ** '''11''' reactions found over '''18''' reactions in the full pathway | ||
| + | * [[PWY-1861]] | ||
| + | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-5723]] | ||
| + | ** '''7''' reactions found over '''10''' reactions in the full pathway | ||
| + | * [[P124-PWY]] | ||
| + | ** '''11''' reactions found over '''15''' reactions in the full pathway | ||
| + | * [[NONOXIPENT-PWY]] | ||
| + | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[P21-PWY]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[CALVIN-PWY]] | ||
| + | ** '''9''' reactions found over '''13''' reactions in the full pathway | ||
| + | * [[P185-PWY]] | ||
| + | ** '''9''' reactions found over '''12''' reactions in the full pathway | ||
| + | {{#set: right-end-position=40391}} | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: left-end-position= | + | {{#set: left-end-position=39738}} |
| − | {{#set: centisome-position= | + | {{#set: common-name=rpe}} |
| − | {{#set: organism associated= | + | {{#set: centisome-position=53.100117 }} |
| + | {{#set: organism associated=Ruminococcus_23112020}} | ||
{{#set: nb reaction associated=1}} | {{#set: nb reaction associated=1}} | ||
| + | {{#set: nb pathway associated=8}} | ||
Latest revision as of 17:40, 15 January 2021
Contents
Gene RUMFLAFD1_RS0110985
- right-end-position:
- 40391
- transcription-direction:
- positive
- left-end-position:
- 39738
- common-name:
- rpe
- centisome-position:
- 53.100117
Organism(s) associated with this gene
Reaction(s) associated
- RIBULP3EPIM-RXN
- Category: annotation
- source: genome_a; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014; tool: pantograph; comment: n.a
- source: output_pantograph_bifidobacteriumadolescentisl2-32; tool: pantograph; comment: n.a
- source: output_pantograph_ecoli; tool: pantograph; comment: n.a
- source: output_pantograph_bthetaiotaomicron_heinken2013; tool: pantograph; comment: n.a
- source: output_pantograph_l_plantarum_wcfs1; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- P122-PWY
- 11 reactions found over 18 reactions in the full pathway
- PWY-1861
- 6 reactions found over 9 reactions in the full pathway
- PWY-5723
- 7 reactions found over 10 reactions in the full pathway
- P124-PWY
- 11 reactions found over 15 reactions in the full pathway
- NONOXIPENT-PWY
- 4 reactions found over 5 reactions in the full pathway
- P21-PWY
- 3 reactions found over 3 reactions in the full pathway
- CALVIN-PWY
- 9 reactions found over 13 reactions in the full pathway
- P185-PWY
- 9 reactions found over 12 reactions in the full pathway
