Difference between revisions of "RUMFLAFD1 RS0113920"
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(Created page with "Category:gene == Gene RUMFLAFD1_RS0118825 == * right-end-position: ** 125056 * transcription-direction: ** positive * left-end-position: ** 123917 * centisome-position: **...") |
(Created page with "Category:gene == Gene RUMFLAFD1_RS0113920 == * right-end-position: ** 70970 * transcription-direction: ** negative * left-end-position: ** 69447 * common-name: ** xylb * c...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene RUMFLAFD1_RS0113920 == |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 70970 |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 69447 |
| + | * common-name: | ||
| + | ** xylb | ||
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 87.694466 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[Ruminococcus_23112020]] | * [[Ruminococcus_23112020]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN | + | * [[GLUCONOKIN-RXN]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** source: [[ | + | *** source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a |
| − | * [[ | + | * [[RXN0-382]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** source: [[ | + | *** source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a |
| − | * [[ | + | *** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a |
| + | * [[XYLULOKIN-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[IDNCAT-PWY]] |
| − | ** '''1''' reactions found over ''' | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
| − | * [[ | + | * [[GLUCONSUPER-PWY]] |
| − | ** ''' | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| − | {{#set: right-end-position= | + | * [[PWY-5530]] |
| − | {{#set: transcription-direction= | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[LARABITOLUTIL-PWY]] |
| − | {{#set: centisome-position= | + | ** '''1''' reactions found over '''2''' reactions in the full pathway |
| + | * [[XYLCAT-PWY]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[DARABITOLUTIL-PWY]] | ||
| + | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
| + | {{#set: right-end-position=70970}} | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: left-end-position=69447}} | ||
| + | {{#set: common-name=xylb}} | ||
| + | {{#set: centisome-position=87.694466 }} | ||
{{#set: organism associated=Ruminococcus_23112020}} | {{#set: organism associated=Ruminococcus_23112020}} | ||
{{#set: nb reaction associated=3}} | {{#set: nb reaction associated=3}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
Latest revision as of 17:41, 15 January 2021
Contents
Gene RUMFLAFD1_RS0113920
- right-end-position:
- 70970
- transcription-direction:
- negative
- left-end-position:
- 69447
- common-name:
- xylb
- centisome-position:
- 87.694466
Organism(s) associated with this gene
Reaction(s) associated
- GLUCONOKIN-RXN
- Category: orthology
- source: output_pantograph_l_plantarum_wcfs1; tool: pantograph; comment: n.a
- Category: orthology
- RXN0-382
- Category: orthology
- source: output_pantograph_bifidobacteriumadolescentisl2-32; tool: pantograph; comment: n.a
- source: output_pantograph_ecoli; tool: pantograph; comment: n.a
- Category: orthology
- XYLULOKIN-RXN
- Category: annotation
- source: genome_a; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_bifidobacteriumadolescentisl2-32; tool: pantograph; comment: n.a
- source: output_pantograph_ecoli; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- IDNCAT-PWY
- 1 reactions found over 3 reactions in the full pathway
- GLUCONSUPER-PWY
- 1 reactions found over 1 reactions in the full pathway
- PWY-5530
- 1 reactions found over 3 reactions in the full pathway
- LARABITOLUTIL-PWY
- 1 reactions found over 2 reactions in the full pathway
- XYLCAT-PWY
- 2 reactions found over 2 reactions in the full pathway
- DARABITOLUTIL-PWY
- 1 reactions found over 2 reactions in the full pathway
