Difference between revisions of "RUMFLAFD1 RS0103925"

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(Created page with "Category:gene == Gene RUMFLAFD1_RS0109030 == * right-end-position: ** 61569 * transcription-direction: ** negative * left-end-position: ** 60130 * centisome-position: ** 8...")
(Created page with "Category:gene == Gene RUMFLAFD1_RS0103925 == * right-end-position: ** 9241 * transcription-direction: ** negative * left-end-position: ** 7856 * centisome-position: ** 80....")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene RUMFLAFD1_RS0109030 ==
+
== Gene RUMFLAFD1_RS0103925 ==
 
* right-end-position:
 
* right-end-position:
−
** 61569
+
** 9241
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* left-end-position:
 
* left-end-position:
−
** 60130
+
** 7856
 
* centisome-position:
 
* centisome-position:
−
** 83.207634    
+
** 80.13873    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[Ruminococcus_23112020]]
 
* [[Ruminococcus_23112020]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[AICARSYN-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[5.4.2.10-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
Line 21: Line 22:
 
*** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a
−
* [[AMPSYN-RXN]]
+
* [[PGMT]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
 +
* [[PHOSMANMUT-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-16424]]
 +
** Category: [[annotation]]
 +
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-7139]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
</div>
−
*** source: [[output_pantograph_faecalibacteriumprausnitziia2-165_heinken2014]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_bifidobacteriumadolescentisl2-32]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_bthetaiotaomicron_heinken2013]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_l_plantarum_wcfs1]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7234]]
+
* [[PWY0-1261]]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''5''' reactions found over '''12''' reactions in the full pathway
−
* [[PWY-6123]]
+
* [[PWY-6749]]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-6124]]
+
* [[UDPNAGSYN-PWY]]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7219]]
+
* [[PWY-5659]]
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
{{#set: right-end-position=61569}}
+
* [[PWY-7586]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7456]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-882]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
{{#set: right-end-position=9241}}
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: left-end-position=60130}}
+
{{#set: left-end-position=7856}}
−
{{#set: centisome-position=83.207634   }}
+
{{#set: centisome-position=80.13873   }}
 
{{#set: organism associated=Ruminococcus_23112020}}
 
{{#set: organism associated=Ruminococcus_23112020}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 17:42, 15 January 2021

Gene RUMFLAFD1_RS0103925

  • right-end-position:
    • 9241
  • transcription-direction:
    • negative
  • left-end-position:
    • 7856
  • centisome-position:
    • 80.13873

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1261
    • 5 reactions found over 12 reactions in the full pathway
  • PWY-6749
    • 2 reactions found over 10 reactions in the full pathway
  • UDPNAGSYN-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5659
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7586
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7456
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-882
    • 2 reactions found over 8 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//rflavgem/index.php?title=RUMFLAFD1_RS0103925&oldid=10257"