Difference between revisions of "ExchangeSeed-PPI"

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(Created page with "Category:reaction == Reaction CARNDETRU-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.149 ec-4.2.1.149] == Reaction formula == * 1 [...")
(Created page with "Category:reaction == Reaction ExchangeSeed-PPI == * direction: ** reversible == Reaction formula == * 1.0 PPI[C-BOUNDARY] '''<=>''' 1.0 PPI[e] == Gene(s) associate...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction CARNDETRU-RXN ==
+
== Reaction ExchangeSeed-PPI ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
* ec-number:
 
** [http://enzyme.expasy.org/EC/4.2.1.149 ec-4.2.1.149]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[L-CARNITINYL-COA]][c] '''<=>''' 1 [[CROTONOBETAINYL-COA]][c] '''+''' 1 [[WATER]][c]
+
* 1.0 [[PPI]][C-BOUNDARY] '''<=>''' 1.0 [[PPI]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[RUMFLAFD1_RS0107935]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[CARNMET-PWY]], L-carnitine degradation I:
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28341 28341]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
{{#set: ec-number=ec-4.2.1.149}}
+
{{#set: nb gene associated=0}}
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=import_from_medium}}
{{#set: reconstruction source=output_pantograph_ecoli}}
 

Latest revision as of 17:50, 15 January 2021

Reaction ExchangeSeed-PPI

  • direction:
    • reversible

Reaction formula

  • 1.0 PPI[C-BOUNDARY] <=> 1.0 PPI[e]

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links