Difference between revisions of "RXN-12515"

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(Created page with "Category:reaction == Reaction DTDPKIN-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.7.4.6 ec-2.7.4.6] == Reaction formula == * 1 AT...")
(Created page with "Category:reaction == Reaction RXN-12515 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.5.3.24 ec-3.5.3.24] == Reaction formula == * 1 CP...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction DTDPKIN-RXN ==
+
== Reaction RXN-12515 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.7.4.6 ec-2.7.4.6]
+
** [http://enzyme.expasy.org/EC/3.5.3.24 ec-3.5.3.24]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[TDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[TTP]][c]
+
* 1 [[CPD-13489]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[SPERMIDINE]][c] '''+''' 1 [[UREA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[RUMFLAFD1_RS0108740]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ecoli]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV:
+
* [[PWY-6834]], spermidine biosynthesis III:
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II:
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation:
 
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP:
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli):
 
** '''12''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III:
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I:
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome_a]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ecoli]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27683 27683]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=35828 35828]
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02093 R02093]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-2.7.4.6}}
+
{{#set: ec-number=ec-3.5.3.24}}
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=0}}
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_ecoli|genome_a}}
+
{{#set: reconstruction source=genome_a}}

Latest revision as of 17:50, 15 January 2021

Reaction RXN-12515

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6834, spermidine biosynthesis III:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links