RXN-12263

Reaction RXN-12263

• direction:
  • left-to-right
• common-name:
  • farnesyl-diphosphate farnesyltransferase
  • presqualene diphosphate synthase
• ec-number:
  • ec-2.5.1.103

Reaction formula

• 2 FARNESYL-PP[c] => 1 CPD-465[c] + 1 PPI[c]

Gene(s) associated with this reaction

• Gene: SJ13532
  • Category: annotation
    • Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
    • Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
    • Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
• Gene: SJ02885
  • Category: annotation
    • Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a

Pathway(s)

• PWY-6105, botryococcenes and methylated squalene biosynthesis:
  • 2 reactions found over 9 reactions in the full pathway
• PWY-5875, staphyloxanthin biosynthesis:
  • 1 reactions found over 9 reactions in the full pathway
• PWY-6767, 4,4'-diapolycopenedioate biosynthesis:
  • 1 reactions found over 9 reactions in the full pathway
• PWY-7072, hopanoid biosynthesis (bacteria):
  • 1 reactions found over 14 reactions in the full pathway

Reconstruction information

• category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
• category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
• category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
• category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a

External links

• METANETX-RXN : MNXR103264
• LIGAND-RXN:
  • R00702
• UNIPROT:
  • O69445
  • P36596
  • O65688
  • O23118
  • O22107
  • Q40472
  • O22106
  • P53800
  • P53799
  • P53798
  • P29704
  • Q04903
  • Q42761
  • Q42760
  • P37268
  • Q02769