Difference between revisions of "1.1.3.37-RXN"

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(Created page with "Category:reaction == Reaction PEPCARBOXYKIN-RXN == * direction: ** left-to-right * common-name: ** phosphoenolpyruvate carboxykinase (atp) * ec-number: ** [http://enzyme.e...")
(Created page with "Category:reaction == Reaction 1.1.3.37-RXN == * direction: ** left-to-right * common-name: ** d-arabinono-1,4-lactone oxidase * ec-number: ** [http://enzyme.expasy.org/EC/...")
 
(5 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PEPCARBOXYKIN-RXN ==
+
== Reaction 1.1.3.37-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** phosphoenolpyruvate carboxykinase (atp)
+
** d-arabinono-1,4-lactone oxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.49 ec-4.1.1.49]
+
** [http://enzyme.expasy.org/EC/1.1.3.37 ec-1.1.3.37]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c]
+
* 1 [[CPD-356]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-1789]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14668]]
+
* Gene: [[SJ14473]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ03315]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* Gene: [[SJ03311]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ14480]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ14476]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type:
+
* [[PWY3O-6]], dehydro-D-arabinono-1,4-lactone biosynthesis:
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation:
 
−
** '''6''' reactions found over '''4''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]], gluconeogenesis I:
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR107687
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18618 18618]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23756 23756]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00341 R00341]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02715 R02715]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P10963 P10963]
 
−
** [http://www.uniprot.org/uniprot/Q9PP01 Q9PP01]
 
−
** [http://www.uniprot.org/uniprot/P43923 P43923]
 
−
** [http://www.uniprot.org/uniprot/P22259 P22259]
 
−
** [http://www.uniprot.org/uniprot/P42066 P42066]
 
−
** [http://www.uniprot.org/uniprot/P49292 P49292]
 
−
** [http://www.uniprot.org/uniprot/O49547 O49547]
 
−
** [http://www.uniprot.org/uniprot/Q9T074 Q9T074]
 
−
** [http://www.uniprot.org/uniprot/Q39294 Q39294]
 
−
** [http://www.uniprot.org/uniprot/Q9RC49 Q9RC49]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=phosphoenolpyruvate carboxykinase (atp)}}
+
{{#set: common-name=d-arabinono-1,4-lactone oxidase}}
−
{{#set: ec-number=ec-4.1.1.49}}
+
{{#set: ec-number=ec-1.1.3.37}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction 1.1.3.37-RXN

  • direction:
    • left-to-right
  • common-name:
    • d-arabinono-1,4-lactone oxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY3O-6, dehydro-D-arabinono-1,4-lactone biosynthesis:
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR107687
  • RHEA:
  • LIGAND-RXN:





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