Difference between revisions of "1.21.3.1-RXN"

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(Created page with "Category:reaction == Reaction RXN-15122 == * direction: ** reversible * common-name: ** threonine deaminase == Reaction formula == * 1 THR[c] '''<=>''' 1 CPD-15056...")
(Created page with "Category:reaction == Reaction 1.21.3.1-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.21.3.1 ec-1.21.3.1] == Reaction formula == * 1 [...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-15122 ==
+
== Reaction 1.21.3.1-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
+
* ec-number:
−
** threonine deaminase
+
** [http://enzyme.expasy.org/EC/1.21.3.1 ec-1.21.3.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[THR]][c] '''<=>''' 1 [[CPD-15056]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[N-5S-5-AMINO-5-CARBOXYPENTANOYL-L-CY]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[ISOPENICILLIN-N]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08066]]
+
* Gene: [[SJ08018]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10955]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5437]], L-threonine degradation I:
+
* [[PWY-5629]], isopenicillin N biosynthesis:
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5826]], hypoglycin biosynthesis:
 
−
** '''2''' reactions found over '''14''' reactions in the full pathway
 
−
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine):
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* METANETX-RXN : MNXR109180
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{{#set: common-name=threonine deaminase}}
+
* RHEA:
−
{{#set: nb gene associated=2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22429 22429]
−
{{#set: nb pathway associated=3}}
+
* LIGAND-RXN:
−
{{#set: reconstruction category=annotation|orthology}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04872 R04872]
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: direction=left-to-right}}
 +
{{#set: ec-number=ec-1.21.3.1}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Latest revision as of 11:21, 18 March 2021

Reaction 1.21.3.1-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5629, isopenicillin N biosynthesis:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR109180
  • RHEA:
  • LIGAND-RXN:





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