Difference between revisions of "2-HYDROXYGLUTARATE-DEHYDROGENASE-RXN"

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(Created page with "Category:reaction == Reaction S-ADENMETSYN-RXN == * direction: ** left-to-right * common-name: ** methionine adenosyltransferase * ec-number: ** [http://enzyme.expasy.org/...")
(Created page with "Category:reaction == Reaction 2-HYDROXYGLUTARATE-DEHYDROGENASE-RXN == * direction: ** reversible * common-name: ** 2-hydroxyglutarate dehydrogenase * ec-number: ** [http:/...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction S-ADENMETSYN-RXN ==
+
== Reaction 2-HYDROXYGLUTARATE-DEHYDROGENASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** methionine adenosyltransferase
+
** 2-hydroxyglutarate dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.6 ec-2.5.1.6]
+
** [http://enzyme.expasy.org/EC/1.1.99.2 ec-1.1.99.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c]
+
* 1 [[Acceptor]][c] '''+''' 1 [[CPD-381]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[Donor-H2]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07891]]
+
* Gene: [[SJ22039]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[ETHYL-PWY]], ethylene biosynthesis I (plants):
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[METHIONINE-DEG1-PWY]], L-methionine degradation I (to L-homocysteine):
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[SAM-PWY]], S-adenosyl-L-methionine biosynthesis:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-5912]], 2'-deoxymugineic acid phytosiderophore biosynthesis:
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5041]], S-adenosyl-L-methionine cycle II:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR115023
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21081 21081]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21252 21252]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00177 R00177]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00298 R00298]
−
* UNIPROT:
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/P19358 P19358]
+
{{#set: common-name=2-hydroxyglutarate dehydrogenase}}
−
** [http://www.uniprot.org/uniprot/P18298 P18298]
+
{{#set: ec-number=ec-1.1.99.2}}
−
** [http://www.uniprot.org/uniprot/Q91X83 Q91X83]
 
−
** [http://www.uniprot.org/uniprot/Q9PNJ8 Q9PNJ8]
 
−
** [http://www.uniprot.org/uniprot/P54419 P54419]
 
−
** [http://www.uniprot.org/uniprot/P56460 P56460]
 
−
** [http://www.uniprot.org/uniprot/Q9JVV6 Q9JVV6]
 
−
** [http://www.uniprot.org/uniprot/Q9CEE0 Q9CEE0]
 
−
** [http://www.uniprot.org/uniprot/O50163 O50163]
 
−
** [http://www.uniprot.org/uniprot/P43762 P43762]
 
−
** [http://www.uniprot.org/uniprot/P23686 P23686]
 
−
** [http://www.uniprot.org/uniprot/P17562 P17562]
 
−
** [http://www.uniprot.org/uniprot/Q7M4Y8 Q7M4Y8]
 
−
** [http://www.uniprot.org/uniprot/Q9S992 Q9S992]
 
−
** [http://www.uniprot.org/uniprot/Q90862 Q90862]
 
−
** [http://www.uniprot.org/uniprot/P13444 P13444]
 
−
** [http://www.uniprot.org/uniprot/P31153 P31153]
 
−
** [http://www.uniprot.org/uniprot/Q00266 Q00266]
 
−
** [http://www.uniprot.org/uniprot/P43281 P43281]
 
−
** [http://www.uniprot.org/uniprot/P40320 P40320]
 
−
** [http://www.uniprot.org/uniprot/P43280 P43280]
 
−
** [http://www.uniprot.org/uniprot/P43282 P43282]
 
−
** [http://www.uniprot.org/uniprot/P48498 P48498]
 
−
** [http://www.uniprot.org/uniprot/P10659 P10659]
 
−
** [http://www.uniprot.org/uniprot/Q39465 Q39465]
 
−
** [http://www.uniprot.org/uniprot/P48466 P48466]
 
−
** [http://www.uniprot.org/uniprot/P49612 P49612]
 
−
** [http://www.uniprot.org/uniprot/P49613 P49613]
 
−
** [http://www.uniprot.org/uniprot/P78003 P78003]
 
−
** [http://www.uniprot.org/uniprot/Q49070 Q49070]
 
−
** [http://www.uniprot.org/uniprot/P0A817 P0A817]
 
−
** [http://www.uniprot.org/uniprot/P50299 P50299]
 
−
** [http://www.uniprot.org/uniprot/O22350 O22350]
 
−
** [http://www.uniprot.org/uniprot/P24260 P24260]
 
−
** [http://www.uniprot.org/uniprot/O60198 O60198]
 
−
** [http://www.uniprot.org/uniprot/Q12642 Q12642]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=methionine adenosyltransferase}}
 
−
{{#set: ec-number=ec-2.5.1.6}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction 2-HYDROXYGLUTARATE-DEHYDROGENASE-RXN

  • direction:
    • reversible
  • common-name:
    • 2-hydroxyglutarate dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR115023
  • RHEA:
  • LIGAND-RXN:





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