Difference between revisions of "2-HYDROXYGLUTARATE-DEHYDROGENASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14540 RXN-14540] == * direction: ** left-to-right * common-name: ** 7-(2-hydroxy-3-amino-3-meth...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] == * direction: ** left-to-right * common-name: ** lipoate-protein ligase ** lip...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14540 RXN-14540] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 7-(2-hydroxy-3-amino-3-methylcarboxypropyl)-wyosine methyltransferase
+
** lipoate-protein ligase
−
* ec-number:
+
** lipoate-atp adenylate transferase
−
** [http://enzyme.expasy.org/EC/2.3.1.231 ec-2.3.1.231]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[OHyW-58-tRNAPhe]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[OHyW-tRNAPhe]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[LIPOIC-ACID]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[LIPOYL-AMP]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13616]]
+
* Gene: [[SJ04393]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11692]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06657]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03663]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY0-522]], lipoate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-522 PWY0-522]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6984]], lipoate salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6984 PWY-6984]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12914 12914]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07770 R07770]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=7-(2-hydroxy-3-amino-3-methylcarboxypropyl)-wyosine methyltransferase}}
+
{{#set: common-name=lipoate-atp adenylate transferase|lipoate-protein ligase}}
−
{{#set: ec-number=ec-2.3.1.231}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb pathway associated=0}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:26, 26 August 2019

Reaction RXN-8654

  • direction:
    • left-to-right
  • common-name:
    • lipoate-protein ligase
    • lipoate-atp adenylate transferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-522, lipoate salvage I: PWY0-522
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6984, lipoate salvage II: PWY-6984
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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