Difference between revisions of "2.4.1.122-RXN"

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(Created page with "Category:reaction == Reaction GALACTOKIN-RXN == * direction: ** reversible * common-name: ** galactokinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.6 ec-2.7.1.6]...")
(Created page with "Category:reaction == Reaction 2.4.1.122-RXN == * direction: ** left-to-right * common-name: ** [glycoprotein]-n-acetylgalactosamine β-1,3-galactosyltransferase * ec-n...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GALACTOKIN-RXN ==
+
== Reaction 2.4.1.122-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** galactokinase
+
** [glycoprotein]-n-acetylgalactosamine β-1,3-galactosyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.6 ec-2.7.1.6]
+
** [http://enzyme.expasy.org/EC/2.4.1.122 ec-2.4.1.122]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ALPHA-D-GALACTOSE]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[GALACTOSE-1P]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-14553]][c] '''+''' 1 [[D-Gal-NAc--Glycoproteins]][c] '''=>''' 1 [[Core1]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17935]]
+
* Gene: [[SJ07193]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19552]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13010]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-3821]], D-galactose detoxification:
+
* [[PWY-7433]], mucin core 1 and core 2 O-glycosylation:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6527]], stachyose degradation:
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6317]], D-galactose degradation I (Leloir pathway):
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY66-422]]:
 
−
** '''5''' reactions found over '''n.a''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR115090
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13556 13556]
+
{{#set: direction=left-to-right}}
−
* LIGAND-RXN:
+
{{#set: common-name=[glycoprotein]-n-acetylgalactosamine &beta;-1,3-galactosyltransferase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01092 R01092]
+
{{#set: ec-number=ec-2.4.1.122}}
−
* UNIPROT:
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P09608 P09608]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/Q01415 Q01415]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P22713 P22713]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P31767 P31767]
 
−
** [http://www.uniprot.org/uniprot/Q8X7P4 Q8X7P4]
 
−
** [http://www.uniprot.org/uniprot/Q9R7D7 Q9R7D7]
 
−
** [http://www.uniprot.org/uniprot/P96993 P96993]
 
−
** [http://www.uniprot.org/uniprot/P04385 P04385]
 
−
** [http://www.uniprot.org/uniprot/P0A6T3 P0A6T3]
 
−
** [http://www.uniprot.org/uniprot/P13227 P13227]
 
−
** [http://www.uniprot.org/uniprot/P39574 P39574]
 
−
** [http://www.uniprot.org/uniprot/P13045 P13045]
 
−
** [http://www.uniprot.org/uniprot/Q9SEE5 Q9SEE5]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=galactokinase}}
 
−
{{#set: ec-number=ec-2.7.1.6}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction 2.4.1.122-RXN

  • direction:
    • left-to-right
  • common-name:
    • [glycoprotein]-n-acetylgalactosamine β-1,3-galactosyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7433, mucin core 1 and core 2 O-glycosylation:
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR115090

Property "Common-name" (as page type) with input value "glycoprotein]-n-acetylgalactosamine β-1,3-galactosyltransferase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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